|
Name : CLJ_B1712 (CLJ_B1712) Accession : YP_002862497.1 Strain : Clostridium botulinum 657 Genome accession: NC_012658 Putative virulence/resistance : Unknown Product : glycosyl hydrolase, family 13 Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1747928 - 1749592 bp Length : 1665 bp Strand : + Note : identified by match to protein family HMM PF00128 DNA sequence : ATGAATAAGACATGGTGGAAAGAAGCTGTTGCATATCAAATATATCCAAGAAGTTTTAAGGATTCAAATGATGATGGTAT AGGAGATATAGAGGGTATAATTTCAAAATTAGATTATTTAAAAGATTTAGGTATAGATATAATTTGGATTTGTCCTATGT ATAAGTCTCCAAATGATGACAACGGTTACGATATAAGCGATTATAAAGCTATAATTGACGAATTTGGAACTATGGGGGAT TTTGATAAGTTACTACAAAAGGTCCATGAAAAAGGTATGAAGCTTATAATAGATTTAGTTATAAATCATACCAGTGATGA GCATAAATGGTTCATTGAATCAAGATCTTCTAAAGATAATCCAAAACGTGATTTTTATATATGGCGTGATGGTAAAGATG GAAAGGAACCTAACAATTGGGAAAGTATATTTAAAGGTTCTGCCTGGGAATATGACTATAATACAGAACAATATTTTCTT CACTTATTTAGTAAAAAGCAACCAGATTTAAATTGGGAAAATGAAAATGTTAGAAAAGAATTATATAAAATGATTAACTG GTGGTTAGATAAGGGAATTGATGGATTTAGAGTAGATGCTATAAGTCATATAAAAAAAGAAAAGGGATTAAAGGACATAC CTAATCCAAAAAATTTAGATTATGTTCCTTCTTTTGAAAAACATATGAATGTAGAAGGAATTCATAAATATCTTAAAGAA TTAAAGGAAAATACCTTTGATAAATATGACATAATAACTGTAGGAGAAGCCAATGGAGTAAATATAAATCAAGCTCCTCA ATGGGTAGGAGAAAAAGATGGCAAATTTAATATGATATTTCAGTTTGAACATCTAGATCTTTGGGATGTAGATCATAAAG AACAGTCTACAATAAAAAAATTAAAAGAAGTATTAAGCAAATGGCAGGAAGGTTTAGAAGGAGTTGGATGGAATGCTTTG TTTATAGAAAATCATGATATTCAAAGGGTAGTCTCAACTTTAGGAGATGATAAAAACTTTTGGGAAGAAAGTTCAAAAGC CTTAGCTCTTATGTATTTTATGCAAAAGGGAACTCCATTTATATATCAAGGGCAAGAAATAGGAATGACTAATGTTAAAT TTGAAGATATTGAAGATTATAATGATATAAAAACTATAAATATTTATAAAGAAAAAATAAAAAAAGGTATACCAAAAGAT CAAGCCCTCAAATATGTATGGGAAACCTCAAGAGATAACTCAAGAACACCAATGCAATGGGATACCACAGAAAATGCTGG ATTTTCAAAGGAAAAACCTTGGATGAAAATTAATTCGAACTATGTAGATATAAACGTTAGGGAACAAGAAAATAACCTAA ATTCTATTTTGAACTTTTATAAAAAAATTATAAGAGTAAAGAAAGAAAATGAGGCACTTATATATGGAAAATATAATTTG ATTTTAGCGCATCATGAACAAATATATGCTTACACAAGAACTTTAGGAAATGAAAAATTTATAGTAATTGCTAATTTAAC AAATAATGAAGTTAAATATACTTATAAAAGAGAAAAACTAAATTATAAAGGATTGATAATTTCAAACTATTCAATAGAGA AGCATGAGGATATAACAGAAATATTATTAAAGCCTTTTGAAGCTAGACTTTATAAAATAGTTTGA Protein sequence : MNKTWWKEAVAYQIYPRSFKDSNDDGIGDIEGIISKLDYLKDLGIDIIWICPMYKSPNDDNGYDISDYKAIIDEFGTMGD FDKLLQKVHEKGMKLIIDLVINHTSDEHKWFIESRSSKDNPKRDFYIWRDGKDGKEPNNWESIFKGSAWEYDYNTEQYFL HLFSKKQPDLNWENENVRKELYKMINWWLDKGIDGFRVDAISHIKKEKGLKDIPNPKNLDYVPSFEKHMNVEGIHKYLKE LKENTFDKYDIITVGEANGVNINQAPQWVGEKDGKFNMIFQFEHLDLWDVDHKEQSTIKKLKEVLSKWQEGLEGVGWNAL FIENHDIQRVVSTLGDDKNFWEESSKALALMYFMQKGTPFIYQGQEIGMTNVKFEDIEDYNDIKTINIYKEKIKKGIPKD QALKYVWETSRDNSRTPMQWDTTENAGFSKEKPWMKINSNYVDINVREQENNLNSILNFYKKIIRVKKENEALIYGKYNL ILAHHEQIYAYTRTLGNEKFIVIANLTNNEVKYTYKREKLNYKGLIISNYSIEKHEDITEILLKPFEARLYKIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-126 | 50 |
