Gene Information

Name : CLJ_B1526 (CLJ_B1526)
Accession : YP_002862315.1
Strain : Clostridium botulinum 657
Genome accession: NC_012658
Putative virulence/resistance : Unknown
Product : C4-dicarboxylate transporter
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 1545321 - 1546841 bp
Length : 1521 bp
Strand : +
Note : identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808

DNA sequence :
GTGACAAAAAAGAAAAAGAAAATAAGCTTTCCGACAGCTTTTACGGTATTGTTTATTGTATTAATTATTGCAGCTATACT
TACTTATGTAGTTCCAGCTGGATCTTATTCAAAATTAAGTTATGATAACGATAGTAAAGTTTTTGTTGTAACTAAACCAG
ATGAATCGACAAATGAATTACCAGCAACACAAAAGACTTTGGATAAACTTAAGATTAAAGTAAGTGTAGAAAAATTTAAG
GACGGTAGTATTAATAAGCCTGTAGCTATTCCAGATACTTATGAACAGGTAGAACAGAAGCCTCAAGGGTTTTTTGAAGT
AATTGAAGCACCTATTAAAGGTGTGTATGATACTATCGATATTATAATGTTTGTACTTATTTTGGGAGGAGTTATTGGTG
TAGTAAATAGTAGTGGAGCATTTGATGCAGGTATTGCCAAACTTTCTGTAGCTACTAAGGGTAAAGAATACTTATTAATA
GTTATTATCACTACATTAATTGCTTTAGGTGGAACTACTTTTGGTTTGGCAGAAGAAACCATTGCATTATATCCAATACT
GGTTCCAGTTTTTATAGCGGCAGGATATGATGCTTTAGTTTGCATTGCAGCCTTGTATATGGGATCATCTATAGGTACTA
TGTTTGCTACGGTAAATCCTTTTTCTGTTGTTATAGCATCTAATACTTCAGGAATATCTATTGCTTCAGGATTTATATTT
AGAATTGTAGGACTTATTTTAGCAGTAGCTATAACCATTGTTTACATTGTAAAATATGGAGTTAAGGTTAAAAAAGATCC
AAGCAAATCTATAATATATGAACAAAGGAAAGAAATACAAGAGAAATTTTTAAAAGATTATAGCAAGGATGATGTTACTC
TAAAATTTTCTTTAGGCCGTAAGCTAATGTTAATAATATTCGCATTAACATTCGTAGTTATGATTTGGGGTGTAGCTTAT
AAAAAATGGTGGTTTACTGAGATGACAGCTCTATTCCTTGTTGTAGGGATTATTTTAGGTGTAATCTCACGAATGGGAGA
AAAGAATTTTGTAGATAAGTTTGTAGCTGGCTCAGCTGATTTGGTAGGAGTTGCATTAGTAATTGGAGTTGCAAGATCTA
TTAATCTTGTTATGGAAAATGGAATGATTTCTGATACAATTTTGTATCATTCTTCAAATATGATATCAGGAATGAATTCT
AGTGTATTTATAATATTTATGTTAATTGTATTTATAGGACTTGGATTTTTTATACCATCATCTTCAGGACTTGCAGTGCT
TTCAATGCCTATTATGGCACCTCTAGCAGACAGTGTAGGATTGCCAAGAGAGGCTATAGTAAATTCTTATATGTTTGGCC
AGGGATTAATTTCATTTATAACTCCAACAGGACTTATATTAGCTACATTAGCTATGGTAGATGTTACTTATGATAAATGG
ATTAAATTTATAATGCCACTTATGGGATATATAGCAGCCTTATCAGCTATAATGTTATTAATACAAAGTTTTGTTGCTTA
A

Protein sequence :
MTKKKKKISFPTAFTVLFIVLIIAAILTYVVPAGSYSKLSYDNDSKVFVVTKPDESTNELPATQKTLDKLKIKVSVEKFK
DGSINKPVAIPDTYEQVEQKPQGFFEVIEAPIKGVYDTIDIIMFVLILGGVIGVVNSSGAFDAGIAKLSVATKGKEYLLI
VIITTLIALGGTTFGLAEETIALYPILVPVFIAAGYDALVCIAALYMGSSIGTMFATVNPFSVVIASNTSGISIASGFIF
RIVGLILAVAITIVYIVKYGVKVKKDPSKSIIYEQRKEIQEKFLKDYSKDDVTLKFSLGRKLMLIIFALTFVVMIWGVAY
KKWWFTEMTALFLVVGIILGVISRMGEKNFVDKFVAGSADLVGVALVIGVARSINLVMENGMISDTILYHSSNMISGMNS
SVFIIFMLIVFIGLGFFIPSSSGLAVLSMPIMAPLADSVGLPREAIVNSYMFGQGLISFITPTGLILATLAMVDVTYDKW
IKFIMPLMGYIAALSAIMLLIQSFVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 4e-95 46
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 4e-95 46
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 3e-95 46
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 5e-95 46
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 5e-95 46
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 4e-95 46