|
Name : hslU (RAF_ORF0403) Accession : YP_002845083.1 Strain : Rickettsia africae ESF-5 Genome accession: NC_012633 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 430835 - 432187 bp Length : 1353 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGAAAGCTACTAAAACTACTTATAAAAAAGATCCTATGGGGCTTACCCCTTCTCAAATAGTGAATGAACTTAATAGATT TATCGTAGGTCAAGAAAAGGCCAAAAAAGCTGTTGCTATTGCACTTAGAAATCGTTGTCGTCGTAAAAGAGTAGAAGGTA ATTTACGTAATGAAATAGTACCGAAAAATATTTTAATGATTGGTTCAACCGGTGTCGGGAAAACGGAAATAGCAAGACGC CTTGCAAAGCTGACTAATTCTCCTTTCTATAAAATTGAAGCAACTAAATTTACCGAAGTCGGATATGTAGGGCGTGATGT AGAATCAATAATTCGTGATTTAGTCGAAATAGCCGTTAATACTGAAAAAACTTTAGCAAAAACGAAAGTAGATATTCATG CCCGTGAAAAAGCGATCGAGAGAATATTAGATAGTTTAGTAGGTAAAACTTCTAGTAGTGAGACTAGAGAAAAGTTCAAA GAAAAAATTTTAAACGGCGAACTTGATGATAAGGAAATTGAAATTAGCGTAGCTGATACTACACCTGTCGGCGGTGGAAG TTTTGAAATACCGGGTATGCCGGGAGCATCTATGGGCGTTCTTAATCTTGGCGATATGATTGGACGAGCCCTTGGCAGTA GTAAGACTAAAACAAAAAAAATGCTAGTTAAAGATGCTATGGCTATTATTATACCTGAAGAATCAGAAAAATTAATAGAC CAAGAAAAAATTATTCAGCAAGCTATAAATTTAGCTGAAAATGACGGTATAGTTTTTATTGACGAAATTGATAAAATAGC TTCAACTGGTAGTTCCGGAGCAAAAAATGCCGCAATAAGTAGAGAGGGAGTGCAAAGAGATTTGCTACCTTTGATAGAGG GCACGACGGTTAATACTAAATATGGACCGGTTAAAACCGATCATATATTATTTATTGCTTCCGGTGCTTTTCATATTGCT AAACCTTCTGATTTATTACCGGAGTTACAAGGAAGGTTACCGATTAGAGTAGAATTAAATTCGCTTACCAAAGATGATAT GATTAAAATATTGCTTGAGCCTGAAACTAGTTTAATAAAACAATATTCGGCGTTAATAGGTACTGAAGACGTACGTCTTG AATTTGCTGCTTCTGCTATTGAGAAGATAGCGGATTATGCGATCACCGTTAATTTAGAAGTCGAAGATATAGGGGCTAGA AGGCTGCATACTATACTTGAGAATTTGCTTGAGGATATAAGCTTTGAAGCTAGCGAAATGAAAGGCAAAAAAATAACTAT CGATGATAAATTTGTAGAAAATCAATTATCAAAAATAATAACTAATCTCGACTTAGCTAAGTTTGTTCTATAG Protein sequence : MKATKTTYKKDPMGLTPSQIVNELNRFIVGQEKAKKAVAIALRNRCRRKRVEGNLRNEIVPKNILMIGSTGVGKTEIARR LAKLTNSPFYKIEATKFTEVGYVGRDVESIIRDLVEIAVNTEKTLAKTKVDIHAREKAIERILDSLVGKTSSSETREKFK EKILNGELDDKEIEISVADTTPVGGGSFEIPGMPGASMGVLNLGDMIGRALGSSKTKTKKMLVKDAMAIIIPEESEKLID QEKIIQQAINLAENDGIVFIDEIDKIASTGSSGAKNAAISREGVQRDLLPLIEGTTVNTKYGPVKTDHILFIASGAFHIA KPSDLLPELQGRLPIRVELNSLTKDDMIKILLEPETSLIKQYSALIGTEDVRLEFAASAIEKIADYAITVNLEVEDIGAR RLHTILENLLEDISFEASEMKGKKITIDDKFVENQLSKIITNLDLAKFVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-92 | 47 |
