Gene Information

Name : lpdA2 (RAF_ORF0708)
Accession : YP_002845341.1
Strain : Rickettsia africae ESF-5
Genome accession: NC_012633
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : 1.8.1.4
Position : 740729 - 742108 bp
Length : 1380 bp
Strand : -
Note : Catalyzes the oxidation of dihydrolipoamide to lipoamide

DNA sequence :
ATGCAAGAATTTGATTTAGTGGTAATAGGTAGCGGTCCAGCCGGTTATACAGGCAGTATTAGGGCTGCTCAACTTGGTAT
GAAAGTAGCGTGTATTGAGAAAAGCGATACTCTTGGCGGCACTTGTTTAAATATAGGATGCATACCATCGAAAGTTTTAC
TGAATTCTTCCGAAAAATATGAAGCAGCTCTAAAACATTTTGAGAATATAGGTATTATTGCGGATGTAAAACTAGATTTA
CAAAAAATGCTAGCTAATAAAGATAAAGTAGTTCTTGATCTCACACAAGGTATAGAAAGTCTCTTTGCCAAAAACAAAGT
TACTAGGATAAAAGGTGAAGCTAAAATTAGCTCTAGTAATATAGTTGAAGTAAATAAAGAGCAAATTAAAGCCAAAAATA
TCCTAATTACTACAGGTTCCAGCATCATAGAAATACCGAATATCAAAATAGACGAAGAATTTATTGTTTCATCTACCGGT
GCTTTGAAACTTTCTAAAGTACCTGAGAACTTAATAGTAGTTGGCGGAGGGTATATAGGCTTAGAACTTGGTTCAGTTTG
GCGTCGTTTGGGAGCTAAAGTAACGGTTATTGAGTATGCACCGAGCATTGTACCTATGCTTGATAAAGAAATTGCTACAC
AATTTATGAAACTACAGCAAAAACAAGGTATAGAGTTTAAACTGAATACTAAAGTGCTATCTGCTGAAGTAAAGTCAGGA
AAAGTAAATCTAACAATAGAGGAGGACGGTAAGAGTTCAGTAGTAACAAGCGATGTTGTGTTGATGGCGGTAGGCAGAAA
AGCCTATACGCAAAATCTAGGGCTTGAGTCTGTCGGTATTATTACGGATAAGCAAGGTAGCATTGAGATTAATGACCGGT
TTCAAACAGCAATTTCAAATATTTATGCAGTCGGTGATGTGGTAAAAGGAGCTATGCTTGCTCATAAAGCCGAGGAAGAG
GCTGTAGCTGCCGTAGAAATTATGGCAGGGCAGGCAGGACATGTTAACTATAACTTAATTCCAAGCGTAATATATACTTA
TCCTGAAGTAGCAAGCGTCGGTGAAACGGAAGAACAGCTAAAAGAAAAAGGCATTAATTATAAAGTCGGTAAGTTTCCGT
TTTTAGCAAATAGTAGAGCAAGAGCAATCGGTAGTACGGAAGGTATGGTTAAGATCCTTGCCGATAGTAAAACCGATAGG
GTTTTAGGAGCTCATATTATAGGAGCTGATGCAGGTACATTAATTGCCGCGCTTACGGCTTATATGGAATTCGGAGCAGC
TTCAGAAGATATAGCAAGAACCTGCCACGCTCACCCAACTTTAAGCGAGGCTATAAAAGAGGCAGCACTTAGTGTAGATA
AGAGGACTATTAATATGTGA

Protein sequence :
MQEFDLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEAALKHFENIGIIADVKLDL
QKMLANKDKVVLDLTQGIESLFAKNKVTRIKGEAKISSSNIVEVNKEQIKAKNILITTGSSIIEIPNIKIDEEFIVSSTG
ALKLSKVPENLIVVGGGYIGLELGSVWRRLGAKVTVIEYAPSIVPMLDKEIATQFMKLQQKQGIEFKLNTKVLSAEVKSG
KVNLTIEEDGKSSVVTSDVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRFQTAISNIYAVGDVVKGAMLAHKAEEE
AVAAVEIMAGQAGHVNYNLIPSVIYTYPEVASVGETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDR
VLGAHIIGADAGTLIAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-72 41