Gene Information

Name : YN1551_1380 (YN1551_1380)
Accession : YP_002840397.1
Strain : Sulfolobus islandicus Y.N.15.51
Genome accession: NC_012623
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1222571 - 1223269 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAAATTACATAATTGAGGCTATAAATTTGAAAAAAGTCTATAAAAGTAAAAAGGTTGAATATGTTGCACTTAGAGG
TGTATCATTAAAAGTAAAGAACGGTGAATTTATAGTCATTGCAGGACCCTCTGGTTCAGGAAAGACTACATTGCTTGATT
TATTAGGTTTACTTGACTCGCCAACTGAAGGAAGAATAATAATAAATAATCAAGATGTAACAAATTTTGATGAGGATAAA
AGACCTATTTTCAGACGAAAGTATATTGGTTTTGTATTTCAATCCTATAATTTAATTACTTATTTAACAGTCTTAGAAAA
TGTAGAGTTAGCGTTAGCTGCTGCTGGTGTGCCAGTTTGGAGAAGGAGAGAAAAAGCTGAAGAAATCCTTTCCATGATTC
CTGGAATGTTAGAACTGAAGAACAAGAAGCCTAATGAACTATCTGGAGGACAGCAGCAAAGAGTAGCTATTGCAAGAGCA
TTAGCAAACGATCCAAAAATATTATTAGCAGATGAGCCAACAGCTAATCTAGATTCGAAAACTGGAGAAGCAATCGTTGA
ATTAATTAAAAAACTTAACGAGCAGAGAGGGGTTACAGTAGTCATGGCTACTTATGATCCTGATATGATGAAATATGCAG
ATAGAATAATTTATATTAGAGATGGATTAATTGAGAAAGAGGTGATACAAAACGAATAA

Protein sequence : 
MSNYIIEAINLKKVYKSKKVEYVALRGVSLKVKNGEFIVIAGPSGSGKTTLLDLLGLLDSPTEGRIIINNQDVTNFDEDK
RPIFRRKYIGFVFQSYNLITYLTVLENVELALAAAGVPVWRRREKAEEILSMIPGMLELKNKKPNELSGGQQQRVAIARA
LANDPKILLADEPTANLDSKTGEAIVELIKKLNEQRGVTVVMATYDPDMMKYADRIIYIRDGLIEKEVIQNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-18 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-20 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-20 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-20 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YN1551_1380 YP_002840397.1 ABC transporter NC_012469.1.7686878. Protein 1e-28 49
YN1551_1380 YP_002840397.1 ABC transporter CP001581.1.gene598.p Protein 3e-25 48
YN1551_1380 YP_002840397.1 ABC transporter NC_008702.1.4606598. Protein 6e-24 46