Gene Information

Name : YN1551_1273 (YN1551_1273)
Accession : YP_002840290.1
Strain : Sulfolobus islandicus Y.N.15.51
Genome accession: NC_012623
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1130279 - 1131295 bp
Length : 1017 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAGACTTTATGAATTATCTTTCGCACAAATTGAAGATTTTTTCTATAAACTAGCAGAAGTTAAGGATATTATAAAGGA
TAGTGGTCTAATGGAATTTCTACCAGAATTAAAGAAATTGGATTCAACAATCCAAACGGGAACTACTAGAGTAAAGCACG
CATTCCCGATCTTTCAAAAAGGAGGAGTTGTAATGGATATTACAAATGTTCAGCAAGCGCAGATAGCAGAAGAAGCAGGC
GCTGTTGCCGTAATGGTTTTAGACAAATTACCCTATGATGTTAGAAAATCTGGTGGAGTTGCAAGAATGGCGGATCCTAA
GATAATTGGGGAGGTAATGAATTCAATAACAATACCAGTAATGGCAAAGGTAAGAATAGGTCATTATTATGAGGCTAAGC
TGCTAGAAGCGTTAGGCGTTGATATGATAGATGAAAGTGAAGTCTTAACACCAGCTGACGAGGAACATCATATAAATAAA
TGGGAGTTTAGCGTACCATTTGTCAATGGGGCTAGAAACCTAGGAGAAGCATTAAGAAGAACAGTGGAAGGAGCATCGAT
GATAAGAACCAAAGGTGAAGCAGGGACTGGAAATGTCAGTGAAGCAGTAAAACACATGAAGATAATAAATAGTGAGATAA
GAAGCTTGATAAGTATGTCGGAGGAAGATAGAGTCAAAAAGGCAAGGGAATATCAAGTTCCTTATCAGCTAGTTGAGCTT
ACTGCGAAAATTAAGAGACTACCAATTGTTAACTTTGCTGCCGGAGGTATAGCGACACCTGCTGATGCTGCGCTTATGAT
GTGGTTGGGTGCTGATGGATTATTTGTTGGTTCTGGTATATTTAAGAGCCAAGATCCAGATGAAAGAGCTAAAGCAGTAG
TACTAGCAGCAGCTTGCTGGGAATATCCAGAAATCGTATTGGAAGCTCAGAAAATGATAAGTGAGCAGAAGAGTATGATG
GGAATTGATATAAAATCTTTAAAACCCGAAGAATTGTTACAAGTGAGAGGATTATGA

Protein sequence :
MRLYELSFAQIEDFFYKLAEVKDIIKDSGLMEFLPELKKLDSTIQTGTTRVKHAFPIFQKGGVVMDITNVQQAQIAEEAG
AVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINK
WEFSVPFVNGARNLGEALRRTVEGASMIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVEL
TAKIKRLPIVNFAAGGIATPADAALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAAACWEYPEIVLEAQKMISEQKSMM
GIDIKSLKPEELLQVRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-65 56
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-65 56
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-65 55