Gene Information

Name : pdxS (cauri_0520)
Accession : YP_002834055.1
Strain : Corynebacterium aurimucosum ATCC 700975
Genome accession: NC_012590
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 553915 - 554817 bp
Length : 903 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACTGAACAGAAGAATGAACAGGGACGCGCCACGACGCGCGTCAAGCGTGGACTGGCTGACATGCTCAAGGGTGGCGT
CATCATGGATGTGGTCACCCCGGAGCAGGCCCGAATTGCTGAGGACGCAGGTGCGTCCGCCGTCATGGCGCTGGAGCGCG
TGCCGGCCGATATCCGCGCCCAGGGCGGCGTGGCCCGCATGTCTGATCCGGACCTCATCGAAGGCATCGTCAACGCCGTG
GACATCCCAGTGATGGCGAAGGCCCGCATCGGTCACTTCGTCGAGGCGCAGATCCTCGGCGAGCTGGGCGTGGACTTCAT
CGACGAGTCCGAGGTGCTCAGCCCGGCCGACTACGTCAACCACATCAACAAGTGGGATTTCGGCGTGCCTTTCGTGTGCG
GTGCGACGAACCTGGGCGAGGCCCTGCGCCGCATCACCGAGGGCGCGGCCATGATTCGCTCCAAGGGCGAGGCCGGCACC
GGCGACGTCTCCGAGGCTGTCAAGCACCTGCGCACCATCAAGGGCGAAATCGCACGCCTCCAGAACCTGGATCGCGACGA
GCTCTACGTCGCCGCCAAGGAACTGCAGGCGCCGTATGACCTGGTTGCTGAGGTTGCAGAGACCGGCAAGCTGCCGGTCG
TGCTGTTCGTCGCCGGTGGCGTCGCCACGCCTGCCGACGCCGCCCTCGTCCGCCAGACGGGTGCTGAAGGCGTCTTCGTC
GGCTCCGGCATCTTCAAGTCCGGCGAGCCCGCGAAGCGCGCGGAGGCCATCGTTAAGGCGGCGACCCTCTACGACCAGCC
GGCCGAGCTGGCCAAGATCAGCCGCGGTCTGGGCGAGGCCATGGTAGGCATCAACGTCAACGACATCCCCGCCCCGCACC
GCTTGGCAGAGCGCGGTTGGTAA

Protein sequence :
MTEQKNEQGRATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAVMALERVPADIRAQGGVARMSDPDLIEGIVNAV
DIPVMAKARIGHFVEAQILGELGVDFIDESEVLSPADYVNHINKWDFGVPFVCGATNLGEALRRITEGAAMIRSKGEAGT
GDVSEAVKHLRTIKGEIARLQNLDRDELYVAAKELQAPYDLVAEVAETGKLPVVLFVAGGVATPADAALVRQTGAEGVFV
GSGIFKSGEPAKRAEAIVKAATLYDQPAELAKISRGLGEAMVGINVNDIPAPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-121 90
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-120 90
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-120 89