Gene Information

Name : cauri_0420 (cauri_0420)
Accession : YP_002833957.1
Strain : Corynebacterium aurimucosum ATCC 700975
Genome accession: NC_012590
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 459399 - 460094 bp
Length : 696 bp
Strand : -
Note : Transposase and inactivated derivatives

DNA sequence :
ATGCTGCAACGCCAGGGCGTTGACATTGGGCGTGAGCAAACAGCCCGGCTGATGCGCAGCGCTGGTCTGTCCGGCAAGGG
AAAAGGTGGGGCACCAATTACGACGCGTAAGCCCACAGGCCCGGATCTTCGCCCAGATTTGGCAAATCGTGAGTTTAAGG
CTCCTGGCCCTAATCGTCTGTGGGTGGCGGACATTACGTATGTGCGCACCAGGAAAGGGTTTGTGTACACAGCTTTTGTC
ACTGATGTGTACTCCCGGAGGATTGTCGGGTGGGCGTTGTCTGATTCGATGCGCACTGAGGCGTTGCCGCTGCGGGCGCT
CAACCAGGCGATCGTGTGCGCCACGGAAACGGCGGGCCTAATTCATCACTCGGACCACGGGTCGCAGTATGTGAGCATCG
TCTACAACGAGCGCCTGGCTGAGCATGGAATTACGGCGTCGACCGGCACTGTTGGTGATTCCTACGACAATGCTCTGGCG
GAGAATGTCAACGGCTCCTACAAGAATGAGCTGATTCATAGGCGAACGTGGGCCGATGTCGTCGACGTGGACATCGCCAC
GTTCGAGTGGGTTAACTGGTGGAACGAATCACGGCTCCACCAGAGCCTAGGCTACCGCACCCCGGCTGAAGTCGAAGCCG
AAATATGGGAACACCACCCCAGTCGAAAAATAATGGAAATCAAGGCAAATGCCTAG

Protein sequence :
MLQRQGVDIGREQTARLMRSAGLSGKGKGGAPITTRKPTGPDLRPDLANREFKAPGPNRLWVADITYVRTRKGFVYTAFV
TDVYSRRIVGWALSDSMRTEALPLRALNQAIVCATETAGLIHHSDHGSQYVSIVYNERLAEHGITASTGTVGDSYDNALA
ENVNGSYKNELIHRRTWADVVDVDIATFEWVNWWNESRLHQSLGYRTPAEVEAEIWEHHPSRKIMEIKANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 9e-86 83
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 5e-37 52
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-36 52
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 7e-37 51
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-37 49
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-37 49
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-37 49
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-37 49
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 5e-38 48
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-38 48
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-37 48
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-37 48
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 8e-37 48
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-35 48
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-36 48
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-36 48
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 3e-36 48
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-36 48
Z1221 NP_286756.1 transposase Not tested TAI Protein 8e-37 48
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 5e-38 48
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-37 48
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cauri_0420 YP_002833957.1 transposase VFG1602 Protein 1e-34 47