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Name : lysS (cauri_2233) Accession : YP_002835762.1 Strain : Corynebacterium aurimucosum ATCC 700975 Genome accession: NC_012590 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2430854 - 2432428 bp Length : 1575 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : GTGAGCGAGAAGAAGAATACTGAAGTTACTGACGTCCCCGAGCAGCTGCGCATTCGCCGCGAGAAACGCGCCCGACTGTT GGAGTCCGGCACCGAGCCTTATCCGGTGACCGTAGACCGCACGATCTCCCTGCGGGATCTCCGCCAGCAGTTCCAGGTCG TTGCCGAGGGCGAAGAGCCGGCCGCGGAAGAGGGCGTCACCTACCTCAGCGCGGGTGAGGAGACTGACGTCGAGGTAGCC ATCGCCGGCCGTCTTATCTTCATGCGCAATACCGGCAAGCTGTGCTTTGCCACCTTGCAGGATGGCGATGGCACCCAGGT GCAGGCCATGCTGTCGCTGGCAGAGGTAGGGGAGGAGCGCCTCGCCGCGTGGAAGTCCGACGTTGACCTAGGTGATTTCA TCTCCGTCCGGGGTCGCGTTATTGCTTCGCGCCGTGGCGAGCTCTCCGTCATGGCCTCCGAATGGACCATGGCGGCGAAG TCCCTGCGCCCGCTCCCAGTTTCCTTCGCTGACATGAACGAGGAAACTCGCGTGCGTCAGCGCTACAACGACCTCATCGT GCGCGAGGAGGCCCGCAAGAATGCCATGACCCGCGTGAAGGTAATGCGTGCGCTGCGCAACTACCTGGAGGATCAGGGTT TCATGGAGATCGAAACCCCGATGCTGCAGACTCTCCACGGCGGTGCCGCAGCCCGCCCGTTTGTGACCCACTCCAATGCC CTGGACATCGACCTCTACCTGCGCATCGCTCCGGAGCTCTTCCTCAAGCGCGCTGTTGTCGGCGGCATTGACCGCGTCTT TGAGATCAACCGCAACTTCCGCAACGAGGGCGTTGACCGCTCCCACTCCCCGGAGTTCGCCATGCTGGAGACTTACGAGG CATGGGGCGATTACAACGACTGTGCCCGCACCATCCGCGAGTCCATCCAGTCCGTGGCCCGCGCAGTCTTCGGTTCCACC ACCGTCACCCTGGCGGATGGCACTGAGTATGATTTCGGCGGCGAAGAGTGGCCGGAGATTGAAATGTACCCCTCCCTCAA CGAGGCTCTGCAGCGCAAGTTCCCGGGCCAGCCGGAGGTCACCATCGACTCCACCGTCGAGGAGCTCAAGGCGCTTGCCG ACGTCATCGGGCTCGACGTCCCGAAGAACGGCGGTTGGGGCCACGGAAAGTTGGTGGAGGAGATCTGGGAGGTGCTCTGC GAGGACCAGCTTGAGGGCCCGATCTTTGTGAAGAACTTCCCCGTTGAGACCTCCCCGCTGACCCGCCAGCACCGCTCGCA GCCAGGCGTGACGGAGAAGTGGGACCTCTACGTGCGCGGTTTCGAGCTGGCCACCGGCTACTCGGAGCTGGTGGATCCCG TAATCCAGCGTGAGCGCTTCGAGGACCAGGCCCGCTTGGCCGCCGGCGGTGATGAAGAAGCCATGGTTTTGGATGAAGAC TTCCTTGCTGCCATGGAGCAGGGCATGCCGCCGACAGCTGGCGCTGGTATGGGCATGGACCGCCTGCTCATGGCCCTGAC CGGCCTGGGCATCCGCGAGACCGTGCTCTTCCCAATCGTGAAACCTGAGCACTAG Protein sequence : MSEKKNTEVTDVPEQLRIRREKRARLLESGTEPYPVTVDRTISLRDLRQQFQVVAEGEEPAAEEGVTYLSAGEETDVEVA IAGRLIFMRNTGKLCFATLQDGDGTQVQAMLSLAEVGEERLAAWKSDVDLGDFISVRGRVIASRRGELSVMASEWTMAAK SLRPLPVSFADMNEETRVRQRYNDLIVREEARKNAMTRVKVMRALRNYLEDQGFMEIETPMLQTLHGGAAARPFVTHSNA LDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDRSHSPEFAMLETYEAWGDYNDCARTIRESIQSVARAVFGST TVTLADGTEYDFGGEEWPEIEMYPSLNEALQRKFPGQPEVTIDSTVEELKALADVIGLDVPKNGGWGHGKLVEEIWEVLC EDQLEGPIFVKNFPVETSPLTRQHRSQPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDEEAMVLDED FLAAMEQGMPPTAGAGMGMDRLLMALTGLGIRETVLFPIVKPEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 0.0 | 80 |
