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Name : sigC (cauri_0193) Accession : YP_002833730.1 Strain : Corynebacterium aurimucosum ATCC 700975 Genome accession: NC_012590 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 211507 - 212055 bp Length : 549 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGAAACGACACTCCGAGCGCGACGATGCGCGCGTCACCGACCTCGCCCTCAAGGCAGGCCGCGGCGATCGCGCAGCCCT CACGGAGTTCATCAAGTCCACCCAGGATGATGTCTGGCGCTTACTCGCCCACCTCGGCGGCCCCGACATCGCAGACGATC TCACCCAAGAGACATATCTGCGCGTCATCGGCGCACTCCCCCGCTTCGCCGCCCGTTCCTCAGCGCGCACATGGCTGCTT TCACTTGCCCGCCGCGTATGGGTAGACAACATCCGCCACGACATGGCCCGCCCGCGCAAGTCCGCCACCGAGTACGAAGA CGCCGCCGCCCTTACCACGACCCCGGAGAGCTCGGGCACGTGGAGCGAGTGGATCGACGCCCGCGCGCTTATCGACGCCC TCCCAGAAGACCGCCGCGAAGCCCTCATCTTGACCCAGGTTTTGGGCTACACCTACGAGGAGGCCGCGAAAATCGCCGGG GTTCGCGTGGGTACAATTCGCTCCCGCGTCGCCCGCGCCCGCAAGGACCTCATCGACCAACGCGGCTAA Protein sequence : MKRHSERDDARVTDLALKAGRGDRAALTEFIKSTQDDVWRLLAHLGGPDIADDLTQETYLRVIGALPRFAARSSARTWLL SLARRVWVDNIRHDMARPRKSATEYEDAAALTTTPESSGTWSEWIDARALIDALPEDRREALILTQVLGYTYEEAAKIAG VRVGTIRSRVARARKDLIDQRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 3e-57 | 78 |
