Gene Information

Name : LS215_1547 (LS215_1547)
Accession : YP_002832199.1
Strain : Sulfolobus islandicus L.S.2.15
Genome accession: NC_012589
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1433863 - 1434561 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAAATTACATAATTGAGGCTATAAATTTGAAAAAAGTCTATAAAAGTAAAAAGGTTGAATATGTTGCACTTAGAGG
TGTATCATTAAAAGTAAAGAACGGTGAATTTATAGTCATTGCAGGACCCTCTGGTTCAGGAAAGACTACATTGCTTGATT
TATTAGGTTTACTTGACTCGCCAACTGAAGGAAGAATAATAATAAATAATCAAGATGTAACAAATTTTGATGAGGATAAA
AGAGCTATTTTCAGACGAAAGTATATTGGTTTTGTATTTCAATCCTATAATTTAATTACTTATTTAACAGTCTTAGAAAA
TGTAGAGTTAGCGTTAGCTGCTGCTGGTGTGCCAGTTTGGAGAAGGAGAGAAAAAGCTGAAGAAATCCTTTCCATGATTC
CTGGAATGTTAGAACTGAAGAACAAGAAGCCTAATGAACTATCTGGAGGACAGCAGCAAAGAGTAGCTATTGCAAGAGCA
TTAGCAAACGATCCAAAAATATTATTAGCAGATGAGCCAACAGCTAATCTAGATTCGAAAACTGGAGAAGCAATCGTTGA
ATTAATTAAAAAACTTAACGAGCAGAGAGGGGTTACAGTAGTCATGGCTACTCATGATCCTGATATGATGAAATATGCAG
ATAGAATAATTTATATTAGAGATGGATTGATTGAGAAAGAGGTGATACAAAACGAATAA

Protein sequence : 
MSNYIIEAINLKKVYKSKKVEYVALRGVSLKVKNGEFIVIAGPSGSGKTTLLDLLGLLDSPTEGRIIINNQDVTNFDEDK
RAIFRRKYIGFVFQSYNLITYLTVLENVELALAAAGVPVWRRREKAEEILSMIPGMLELKNKKPNELSGGQQQRVAIARA
LANDPKILLADEPTANLDSKTGEAIVELIKKLNEQRGVTVVMATHDPDMMKYADRIIYIRDGLIEKEVIQNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-19 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-21 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LS215_1547 YP_002832199.1 ABC transporter NC_012469.1.7686878. Protein 1e-29 50
LS215_1547 YP_002832199.1 ABC transporter CP001581.1.gene598.p Protein 3e-26 49
LS215_1547 YP_002832199.1 ABC transporter NC_008702.1.4606598. Protein 1e-24 47
LS215_1547 YP_002832199.1 ABC transporter CP001581.1.gene798.p Protein 3e-23 41
LS215_1547 YP_002832199.1 ABC transporter NC_012469.1.7685735. Protein 1e-23 41