|
Name : cbbT (NGR_c06570) Accession : YP_002825203.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 713124 - 715115 bp Length : 1992 bp Strand : + Note : - DNA sequence : TTGACAGCAGTTTCGGTCCGCGATCTGGCAAACGCTATCCGCGTCCTATCAATCGACGGCGTGGAGGCGGCCAATTCCGG TCACCCTGGAATGCCGATGGGCATGGCCGATGCGGCGGCCGTTCTGTTCGGCAAGCACCTCAAATTCGATGCGAGCGAAC CCGGCTGGCCGGATCGCGACCGGTTCGTGCTGTCGAACGGCCATGGCTCGATGCTGCTGTACAGCCTTCTCCACCTAACC GGTTACAAGGAAATGACCATTGAGGAGATCCGCAATTTCCGCCAGTGGGATTCGAAAACGCCGGGCCACCCGGAATACGG CCACACCGCCGGCGTCGAGACAACGACGGGGCCACTAGGGCAGGGCATTGCGTCCGCGGTCGGCATGGCTATCGCGGAGC GGCGCCTGGGCGCGGAATTCGGCACCGCGCTCGTCGATCACCACACCTATGTCTTCTGTGGAGACGGATGCCTCATGGAA GGCGTCGGCCAGGAAGCTGCCTCGCTGGCGGGCCATCTTCAACTCGGCAAGCTGATCGTCCTCTATGACGACAACTCCAT CACGATCGACGGTTCGACTGCGATAGCGTTTTCGGAAGACGTGCTTGCGAGGTTCGATGCATACGGATGGCACACGCAAC GCGTAGATGGCCATGACGCTGAAGCAATCGACGCGGCGATCTCGAACGCGAAAGCGGAAACATCGAGACCGTCCCTCGTC GCGCTGAAAACCATCATTGGGTTCGGTTCTCCGTCAAAGGCAGGAAAGAGCTCGGTGCACGGCGCGCCGCTGGGCGCGAG CGAAGCCGCCGCGACAAAGACGGCCTATGGCTGGACGGCAGATCCTTTCGAGATTCCAACGCCGATCCTGGAAACATGGC GCGCGATCGGCGCGAAGGGCGCGAAGTCCCGCAGAGAGTGGCAAGCGCGGCTCGAAGCAGCGGAACCTGACGTCAAAAGC GAGTTCGAGCGTCGCACCGCGGGATCGTTGCCGCCGCATTACGAGGAGACGGTGAACGCCGCCAAGGCGAATCTGCTCGA TAGGCCGCAATCAGTGGCCACGCGCAAGGCAAGCCAGATCGCCCTGGAGGCGCTGACGGAGTTGCTTCCCGAAATGATTG GCGGCTCGGCGGACCTTACCCACTCGAACTTGACGCGTGTTCCGGCCGTCGACAGCGATTTCACCGCCGTTAGAAGCGGG CGTTATGTCAGCTATGGCGTGAGGGAGTTCGCAATGGCCGCCGCAATGAACGGCATGGCGGTTCATGGCGGCTTCATACC GTATGGCGGCACGTTCCTCGTATTCTCGGACTATTGCCGCAACGCCATTCGCGTGGCGGCTTTGATGGGCGCGCGCTCCA TCTTCGTGATGACGCATGATTCCATCGGTCTCGGAGAAGACGGCCCGACCCACCAGCCCGTCGAGCATCTTGCCAGCCTC AGGGCGATGCCGAACTTGCATGTGTTCCGGCCGGCGGACACGATCGAAACGCTCGAATGCTGGGACATCGCGATAACCAG CAAGAACACGCCGTCCGTCCTGGCGCTATCGCGGCAGAATGTTCCCCAGCTCCGCTCGGAACGCGATGGCTCCAATCGCT GCGCGCGAGGAGCCTACGTGCTGCGGGAAGCCAGCAGGGAACGCGCGGTCACGCTCATCGCGACTGGAACGGAGGTAGTG CTTGCGATCCAGGCCGCCGAAGAGCTCGAAGCGAGAAATATTCCAGCCGCGGTCGTCTCGATGCCGAGCTGGGACCTCTT CGAAAAACAGGCCAGGGACTACCGGCACGCGGTGCTGGGGGACGCGCCACGCATCGCGGTGGAAGCGCTCTCGAAGTTCG GCTGGACCAGGTATGTGGACAGCGAAGACGACGTGATTGGGATGTCCGGCTTTGGCGCGTCCGCGCCGGCGGAGACGTTG TACGAAAAATTCGGAATTACCCGTGACGCGATAGTCGCGCGCGCAGTTGCAAGGGTGAGGGGCGAAGAATGA Protein sequence : MTAVSVRDLANAIRVLSIDGVEAANSGHPGMPMGMADAAAVLFGKHLKFDASEPGWPDRDRFVLSNGHGSMLLYSLLHLT GYKEMTIEEIRNFRQWDSKTPGHPEYGHTAGVETTTGPLGQGIASAVGMAIAERRLGAEFGTALVDHHTYVFCGDGCLME GVGQEAASLAGHLQLGKLIVLYDDNSITIDGSTAIAFSEDVLARFDAYGWHTQRVDGHDAEAIDAAISNAKAETSRPSLV ALKTIIGFGSPSKAGKSSVHGAPLGASEAAATKTAYGWTADPFEIPTPILETWRAIGAKGAKSRREWQARLEAAEPDVKS EFERRTAGSLPPHYEETVNAAKANLLDRPQSVATRKASQIALEALTELLPEMIGGSADLTHSNLTRVPAVDSDFTAVRSG RYVSYGVREFAMAAAMNGMAVHGGFIPYGGTFLVFSDYCRNAIRVAALMGARSIFVMTHDSIGLGEDGPTHQPVEHLASL RAMPNLHVFRPADTIETLECWDIAITSKNTPSVLALSRQNVPQLRSERDGSNRCARGAYVLREASRERAVTLIATGTEVV LAIQAAEELEARNIPAAVVSMPSWDLFEKQARDYRHAVLGDAPRIAVEALSKFGWTRYVDSEDDVIGMSGFGASAPAETL YEKFGITRDAIVARAVARVRGEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-155 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-151 | 52 |
