Gene Information

Name : NGR_c06300 (NGR_c06300)
Accession : YP_002825176.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 685088 - 685798 bp
Length : 711 bp
Strand : +
Note : phosphoribuloseisomerase

DNA sequence :
GTGAAGCACTCAGCACTGCGCAAAGCCGTCCTGGACGCGAATTTCGAACTCTATGAGAGCGGCCTCGTGATCTCCACGTT
CGGCAACGTCAGCGCCATCGATCGAGTGAACGGTGTCGTCGCGATCAAACCCAGCGGCGTCTCGTACAAGGCCATGGACA
CGGGCGACATCGTCATCACCGATCTGGACGGCCGCGTTGTAAACGGCGACTTGCGCCCTTCAAGCGACCTCGACACGCAC
ATCGAGCTCTACAAGAGCTTCCCGACGATCGGCGCGGTAGTCCATACGCACTCGTTCTTCGCGACAGCTTGGGCGCAATC
CGGTCAGCCGATCCCGGTGATGGGCACGACTCACGCCGACTACTTCAACGGAACCATCCCGGTGACGCGTCAGCTGACTG
ACAGCGAAATCCGGGACGATTACGTGCGAAACACAGGCATTGTGATCGCCGAGGCGCTCGGGAACCGCGATCCGCTGTCG
ATTCCTGCCGCTCTCGTCAACGACCATGGCCCCTTCTGCTGGGGCAAGGACGCGGCCGACGCGGTCCACAATGCCGAGAT
GCTCGAGGCGGTGGCCAAGATTGCGTTCCATTCGCGCCAGATCAGCTTGGAGAGCCCCGAGATTTCGGCGGCTCTGCTCG
ATCGGCACTTTCAACGAAAGCACGGCAGCGGGGCGACATACGGCCAGACCGGGCGATCAAAACAGGTATGA

Protein sequence :
MKHSALRKAVLDANFELYESGLVISTFGNVSAIDRVNGVVAIKPSGVSYKAMDTGDIVITDLDGRVVNGDLRPSSDLDTH
IELYKSFPTIGAVVHTHSFFATAWAQSGQPIPVMGTTHADYFNGTIPVTRQLTDSEIRDDYVRNTGIVIAEALGNRDPLS
IPAALVNDHGPFCWGKDAADAVHNAEMLEAVAKIAFHSRQISLESPEISAALLDRHFQRKHGSGATYGQTGRSKQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-46 48