|
Name : NGR_c06130 (NGR_c06130) Accession : YP_002825159.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 667797 - 669275 bp Length : 1479 bp Strand : - Note : - DNA sequence : ATGCTAACCTACAAGATGTTGATCGACGGCCAATGGGCCGACGCGGCGCTCGGCGAGACGTTCGAGACCCGCAATCCCTA CACTGGGGACGTCTGGGCAGCCATACCAAAGGGAACGAAGGAAGACGCTGAACGGGCGGTCGAGGCGGCGCATAAAGCTT TCACCAGCGGGACTTGGCCCAAGCTCACCGCGAGCGACCGTGGCCACCTCCTCCGCCGACTGGGCGACCTGATCGCGGAG AACGCCGAGCGCCTCGCCCGCATCGAGGTGACGGACAACGGCAAACTCATCAACGAGATGCTGTTCCAACTCAAGTATAT CCCGCAGTGGTATCACTACTTCGGCGGCTTGGCGGACAAGATCGAGGGCGCGGTCATCCCTATCGACAAGCCCGAGACCT TCAACTACACCCGCAACGAGCCGCTGGGCGTCTGTGTCGGCATCACGCCCTGGAACTCCCCTCTCCTGCTTCTCTCCTAC AAGTTGGCTCCCGCTCTCGCGGCAGGAAACACCTTCGTCGCGAAGCCCTCGGAGTTCACATCGGCCTCGACGCTGGAATT TGCCAAGCTCGTTGAGCAGGCCGGGTTCCCCCCGGGCGTCTTCAATGTCGTCACGGGCTTCGGGGCCGACGTGGGCGAGA CGCTGACGACCCATAAACACGTCGCGAAGATCGCGTTCACCGGAAGCGAAGGCACGGGGCGCAAGATCGGAGAGTTGGCC GCCCGGAACTTCAAGAAGGTCACGCTCGAGTTGGGCGGAAAGAGCCCGCACATCGTCTTCGCGGACGCCGAGATAGACAA TGCCGTCAACGGCGTCATTTCGGGCATCTTCGCCGCCACGGGCCAGACCTGCATCGCGGGCTCGCGCCTCCTCGTCGAAA GCAAAATCCATGATCAAGTTCTGGAGAAAGTCATAGCGCTCGCTAAGACGGCCCGGATGGGAGATCCGCTCTCGACCTCG ACGCAAGTCGGTCCGGTTACGACGCCCCCCCAACTCGAGAAAATCCTGGGCTACATCGACATCGCCAAGGGCGAAGGCGC GGAGTGTCTCCTCGGCGGCGCACGCCCGTCCAATTCCGAGCTCGGCAATGGCTGGTTCGTGGAGCCCACGATTTTCGCCG GCGTCCGGAATTCTATGCGTATCGCGCAGGAGGAAGTCTTCGGTCCTGTCCTCGCCGTCATTCCGTTCGACACCGAGGAA GAGGCGATCCATATCGCGAACGACACGAATTACGGTTTGGCCGCGGGCTTTTGGACTCAGGACATGCGTCGCATGCTGCG GGTCTCGGCTGCCATCCAGGCGGGCACGGTTTGGGTCAACACCTACCGGACCATCAGCTACATGTCGCCGCTCGGTGGCT ACAAACACTCGGGCATCGGCCGGGAGAACGGCATGGCGTCCATTCAGAACTACCTGCAGACCAAGAGCGTCATGATCTCC ACAGCCGAGAGTGTCGCCAACCCGTTCATCATGAGGTGA Protein sequence : MLTYKMLIDGQWADAALGETFETRNPYTGDVWAAIPKGTKEDAERAVEAAHKAFTSGTWPKLTASDRGHLLRRLGDLIAE NAERLARIEVTDNGKLINEMLFQLKYIPQWYHYFGGLADKIEGAVIPIDKPETFNYTRNEPLGVCVGITPWNSPLLLLSY KLAPALAAGNTFVAKPSEFTSASTLEFAKLVEQAGFPPGVFNVVTGFGADVGETLTTHKHVAKIAFTGSEGTGRKIGELA ARNFKKVTLELGGKSPHIVFADAEIDNAVNGVISGIFAATGQTCIAGSRLLVESKIHDQVLEKVIALAKTARMGDPLSTS TQVGPVTTPPQLEKILGYIDIAKGEGAECLLGGARPSNSELGNGWFVEPTIFAGVRNSMRIAQEEVFGPVLAVIPFDTEE EAIHIANDTNYGLAAGFWTQDMRRMLRVSAAIQAGTVWVNTYRTISYMSPLGGYKHSGIGRENGMASIQNYLQTKSVMIS TAESVANPFIMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 5e-63 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-65 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-65 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-65 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-65 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NGR_c06130 | YP_002825159.1 | aldehyde dehydrogenase | VFG0082 | Protein | 2e-63 | 42 |
