Gene Information

Name : nagA (NGR_c35340)
Accession : YP_002828011.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : 3.5.1.25
Position : 3752569 - 3753729 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGCGAGAAAGAAGATCACCGGAGCGCGGATTTTCGACGGCATCGACTGGCACGACGGATGCACGCTCCTCATTGA
GGCAGGGCATATCAAGGGGATCGCGCCGCCCGGTGCCACTGCCGGCGAGGCGGAGACGGTCGACGCGCGCGGCCTGCTTC
TCGTGCCCGGCTTCATCGACCTGCAGGTCAACGGCGGCGGCGGCGCGCTCTTGAACGAGCAGCCGACGCTCGACGGCATC
CGGCAGATCTGCGCGGCGCACGCCAAATTCGGCACGACGGCGCTGCTGCCGACGCTGATTACCGACACGCGCGAGATCCG
CGCCAAGGCGATCGAGGCTGGTCTTGCGGCCCAGGCCGCGGCGGTGCCCGGTTTCCTCGGCCTGCATCTCGAAGGCCCGC
ATCTCTCGGTCGCCCGCAAGGGAGCCCACGACCCGGCGCTGATCCGCCCGATGGAGGACGCCGATCTCACCGAGATGCTC
GCCTGCGTGAAGGCGCTCGGCTCCCTGATGGTCACCGTCGCGCCGGAAAATACGACGAAGGAGCAGGTGCGCGCCCTTGC
AACGGCCGGCGCCGTGGTCAGCCTCGGTCATACGGATGTCGGCTTCGAGACGGCCTGTGCCTATGCGAAGGCGGGCGCCC
GGACCGTTACGCATCTCTTCAACGCCATGAGCGGCCTTGGCCACCGCGAGCCGGGGGTCGTCGGCGCAGCACTTGCCACC
GGCACGCTGCATGCCGGGCTGATCGCCGATGGCTTCCACGTCGATCCGGCCTCGATGGGCATCGCGCTGCGCGGCAAGCG
GGGGCCGGGGCAGATTTTCCTGGTGACCGACGCCATGTCGCCGATCGGCACCGATATGAAGAGCTTTTTCCTGAACGGCC
GCGAGATCCTGCGCAAGGACGGACGCCTGACGCTTGCCGACGGCACTCTCGCCGGCGCCGATATCGACATGCTCTCTTCC
GTCCGCTTCGTGCATGAAAAGCTCGGCCTGCCGATCGAGGAGGCGATCCGCATGGCCTCCGCCTATCCGGCCGACGTGAT
GGGCATCGCCTCGCACAAGGGCCGGCTCCTGCCCGGCACTGACGCCGATTTCGTGCTGTTGACGCCGGAACTCGGTATGA
AATCGACCTGGATCGGTGGGGAACGGGTCTTTGCCGCTTAG

Protein sequence : 
MTARKKITGARIFDGIDWHDGCTLLIEAGHIKGIAPPGATAGEAETVDARGLLLVPGFIDLQVNGGGGALLNEQPTLDGI
RQICAAHAKFGTTALLPTLITDTREIRAKAIEAGLAAQAAAVPGFLGLHLEGPHLSVARKGAHDPALIRPMEDADLTEML
ACVKALGSLMVTVAPENTTKEQVRALATAGAVVSLGHTDVGFETACAYAKAGARTVTHLFNAMSGLGHREPGVVGAALAT
GTLHAGLIADGFHVDPASMGIALRGKRGPGQIFLVTDAMSPIGTDMKSFFLNGREILRKDGRLTLADGTLAGADIDMLSS
VRFVHEKLGLPIEEAIRMASAYPADVMGIASHKGRLLPGTDADFVLLTPELGMKSTWIGGERVFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-39 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-39 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 3e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_002828011.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 4e-40 41