Gene Information

Name : NGR_c35250 (NGR_c35250)
Accession : YP_002828002.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Unknown
Product : sugar ABC transporter ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3839
EC number : -
Position : 3743313 - 3744323 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence :
GTGGGATCACTGCAACTCAAATCCATCCGCAAGGCCTATGGCGGCCATGAGGTGCTGAAGGGCATCGACCTCGAGGTGAA
GGACGGCGAATTCGTCATCTTCGTCGGCCCCTCCGGCTGCGGAAAGTCCACCCTGCTCAGGACCATTGCCGGCCTCGAGG
ACGCGACCTCCGGCAGCGTGCAGATCGACGGCGTCGAAGTCGGCCATGTGGCGCCCGCCAAACGCGGCATAGCCATGGTC
TTCCAGTCCTATGCGCTCTATCCGCACCTGACGGTGAAGGACAATATGGGCCTGGGGCTGAAACAGGCCGGCGTGCCGAA
GCCCGAGATCGAGGAGAAGGTCGGCAAGGCGGCCGGCATGCTGTCGTTGGAACCCTATCTCGCCCGCCGCCCGGCCGAAC
TTTCCGGCGGCCAGCGGCAGCGCGTAGCGATCGGCCGCGCCATCGTGCGCGAGCCGAAACTCTTTTTGTTCGACGAGCCC
TTGTCGAACCTCGACGCGGCGTTGCGCGTCAACACCCGCCTCGAAATCGCCCGGCTGCATCGCAGCCTCAAGGCGACGAT
GATCTATGTCACGCACGACCAGGTCGAGGCGATGACGCTGGCCGACAAGATCGTCGTCCTGAACGGCGGCCGCATCGAGC
AGGTCGGCTCGCCGATGGAACTCTATAACCGTCCCGCCAATCTCTTCGTCGCCGGCTTCATCGGCTCGCCGCAGATGAAT
TTCATCGACGGCGACAGGTTCGGCGACGGCGAGGCCAAGACCGTCGGTATCCGCCCCGAACATATCGGCCTGTCGCGCGA
CGGCGGCAACTGGAAGGCGAAGGTGATCCATGTCGAGCATCTCGGCGCCGACACCATCGTCTATCTGGAATCCGACGAGG
TCGGGCCGCTGACGGTGCGGCTCTTCGGCGAACACCGCTATGCGGCCGACGACGTCGTCCACGCCACCCCGGTGATCGGC
GGCGTGCACCGCTTCGACTCCGAGGGCCGGGCGATCAACTCCGGGCAGTAG

Protein sequence :
MGSLQLKSIRKAYGGHEVLKGIDLEVKDGEFVIFVGPSGCGKSTLLRTIAGLEDATSGSVQIDGVEVGHVAPAKRGIAMV
FQSYALYPHLTVKDNMGLGLKQAGVPKPEIEEKVGKAAGMLSLEPYLARRPAELSGGQRQRVAIGRAIVREPKLFLFDEP
LSNLDAALRVNTRLEIARLHRSLKATMIYVTHDQVEAMTLADKIVVLNGGRIEQVGSPMELYNRPANLFVAGFIGSPQMN
FIDGDRFGDGEAKTVGIRPEHIGLSRDGGNWKAKVIHVEHLGADTIVYLESDEVGPLTVRLFGEHRYAADDVVHATPVIG
GVHRFDSEGRAINSGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-33 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-34 41