Gene Information

Name : NGR_c34790 (NGR_c34790)
Accession : YP_002827956.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 3686992 - 3688620 bp
Length : 1629 bp
Strand : -
Note : -

DNA sequence :
ATGACAGACACCCTCCTTTCCGTGCGCGACCTCTCCGTCGCCTTCCACCAGGGCGGTGACACCTCCGTCGCCGTCGATCA
CATCTCCTTCGACATCAAGCGCGGCGAAACCGTTGCGCTCGTCGGCGAGTCCGGCTCGGGCAAGTCGGTCTCGGCCAACT
CCATCCTGAAGCTCCTGCCCTACCCGGCCGCCAGCCACCCGAGCGGCGAAATCCTCTTCAACGGCAAGGATCTCCTGAAG
GCCAGCAACGCCGAACTGCGCCATGTCCGCGGCAACGACATCACCATGATCTTCCAGGAGCCTATGACGTCGCTCAATCC
GCTGCACACGATCGAGCAGCAGATCGGCGAAATCCTCGAGCTCCACCAGGATCTCAAAGGACCGGCGGCGCGCGCCAGGA
CGCTGGAACTTCTCAACCAGGTCGGCATCCGCGAGGCGGAGAAGCGGCTCGGCGCCTATCCGCACCAGCTTTCCGGTGGT
CAGCGACAGCGCGTGATGATCGCCATGGCACTTGCCAACCGGCCGGAGCTCCTGATCGCCGACGAGCCGACGACGGCGCT
CGACGTCACCGTGCAGGCGCAGATCCTCGAACTCCTGAAGTCGCTCAAGGACCAGCACGGCATGTCCATGCTGTTCATCA
CCCACGACCTCGGCATCGTCCGCAAGATCGCCGACCGGGTCTGCGTGATGACCAAGGGCAAGATCGTCGAGACCGGCCCG
ACCGCCGAGATCTTCGCCAATCCGCAGCATTCCTATACGCGGCACCTGCTCGCCTCCGAGCCGAAGGGCGAGCCGCCTCT
TTCCGATCAATCGAAACCGATTGTCGTCGAGGGGAAGGACGTGAAGGTCTGGTTCCCGATCAATGCGGGCTTCCTGCGCC
GCGTCGTCGACCATGTGAAGGCGGTTGACGGCATCGACCTGACGCTGCGCGCCGGCCAGACGCTCGGTGTCGTCGGCGAA
TCCGGTTCGGGCAAGACGACGCTCGGCCTGGCGCTGACGCGGCTGATCTCGTCGAAGGGACGGATCGCTTTCGTCGGCCA
GGACATCGATGCCTACAGTTTCGGCGAGATGCGGCCGCTCCGGAACCGCATGCAGGTGGTCTTCCAGGATCCATACGGCT
CGTTGAGCCCGCGCATGTCGGTTGCCGACATTATTGGCGAGGGGTTGAAGATCCACGAGAGGACGCTCTCCGACGATGCG
CGCGACGCACGCGTTGCTGCAGCACTGCAGGAGGTCGGCCTCGACCCCGCCACCCGCTGGCGCTATCCGCACGAATTCTC
CGGCGGCCAGCGGCAGCGTATCGCGATTGCCCGCGCCATGGTGCTCAAACCACAATTCGTCATGCTCGACGAACCGACTT
CGGCGCTCGACATGAGCGTGCAGGCCCAGGTCGTCGACCTCCTGCGCGACCTGCAGCGCAAGCACAACCTCGCCTATCTG
TTCATCAGCCACGACTTGAAGGTCGTGCGGGCGCTTGCCAACGAGGTGATCGTCATGCGGCTCGGCAAGGTGGTCGAACA
GGGACCGGCCGAACGCATCTTCGAGGCGCCCGCCGAAGACTACACCAGGGCGCTGATGGCCGCCGCCTTCAATCTCGAAG
CCGTCAACCTGTCCGCCATCCGTCAGTAG

Protein sequence :
MTDTLLSVRDLSVAFHQGGDTSVAVDHISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLK
ASNAELRHVRGNDITMIFQEPMTSLNPLHTIEQQIGEILELHQDLKGPAARARTLELLNQVGIREAEKRLGAYPHQLSGG
QRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDQHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGP
TAEIFANPQHSYTRHLLASEPKGEPPLSDQSKPIVVEGKDVKVWFPINAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGE
SGSGKTTLGLALTRLISSKGRIAFVGQDIDAYSFGEMRPLRNRMQVVFQDPYGSLSPRMSVADIIGEGLKIHERTLSDDA
RDARVAAALQEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYL
FISHDLKVVRALANEVIVMRLGKVVEQGPAERIFEAPAEDYTRALMAAAFNLEAVNLSAIRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-98 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-84 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-84 41