|
Name : NGR_c34790 (NGR_c34790) Accession : YP_002827956.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 3686992 - 3688620 bp Length : 1629 bp Strand : - Note : - DNA sequence : ATGACAGACACCCTCCTTTCCGTGCGCGACCTCTCCGTCGCCTTCCACCAGGGCGGTGACACCTCCGTCGCCGTCGATCA CATCTCCTTCGACATCAAGCGCGGCGAAACCGTTGCGCTCGTCGGCGAGTCCGGCTCGGGCAAGTCGGTCTCGGCCAACT CCATCCTGAAGCTCCTGCCCTACCCGGCCGCCAGCCACCCGAGCGGCGAAATCCTCTTCAACGGCAAGGATCTCCTGAAG GCCAGCAACGCCGAACTGCGCCATGTCCGCGGCAACGACATCACCATGATCTTCCAGGAGCCTATGACGTCGCTCAATCC GCTGCACACGATCGAGCAGCAGATCGGCGAAATCCTCGAGCTCCACCAGGATCTCAAAGGACCGGCGGCGCGCGCCAGGA CGCTGGAACTTCTCAACCAGGTCGGCATCCGCGAGGCGGAGAAGCGGCTCGGCGCCTATCCGCACCAGCTTTCCGGTGGT CAGCGACAGCGCGTGATGATCGCCATGGCACTTGCCAACCGGCCGGAGCTCCTGATCGCCGACGAGCCGACGACGGCGCT CGACGTCACCGTGCAGGCGCAGATCCTCGAACTCCTGAAGTCGCTCAAGGACCAGCACGGCATGTCCATGCTGTTCATCA CCCACGACCTCGGCATCGTCCGCAAGATCGCCGACCGGGTCTGCGTGATGACCAAGGGCAAGATCGTCGAGACCGGCCCG ACCGCCGAGATCTTCGCCAATCCGCAGCATTCCTATACGCGGCACCTGCTCGCCTCCGAGCCGAAGGGCGAGCCGCCTCT TTCCGATCAATCGAAACCGATTGTCGTCGAGGGGAAGGACGTGAAGGTCTGGTTCCCGATCAATGCGGGCTTCCTGCGCC GCGTCGTCGACCATGTGAAGGCGGTTGACGGCATCGACCTGACGCTGCGCGCCGGCCAGACGCTCGGTGTCGTCGGCGAA TCCGGTTCGGGCAAGACGACGCTCGGCCTGGCGCTGACGCGGCTGATCTCGTCGAAGGGACGGATCGCTTTCGTCGGCCA GGACATCGATGCCTACAGTTTCGGCGAGATGCGGCCGCTCCGGAACCGCATGCAGGTGGTCTTCCAGGATCCATACGGCT CGTTGAGCCCGCGCATGTCGGTTGCCGACATTATTGGCGAGGGGTTGAAGATCCACGAGAGGACGCTCTCCGACGATGCG CGCGACGCACGCGTTGCTGCAGCACTGCAGGAGGTCGGCCTCGACCCCGCCACCCGCTGGCGCTATCCGCACGAATTCTC CGGCGGCCAGCGGCAGCGTATCGCGATTGCCCGCGCCATGGTGCTCAAACCACAATTCGTCATGCTCGACGAACCGACTT CGGCGCTCGACATGAGCGTGCAGGCCCAGGTCGTCGACCTCCTGCGCGACCTGCAGCGCAAGCACAACCTCGCCTATCTG TTCATCAGCCACGACTTGAAGGTCGTGCGGGCGCTTGCCAACGAGGTGATCGTCATGCGGCTCGGCAAGGTGGTCGAACA GGGACCGGCCGAACGCATCTTCGAGGCGCCCGCCGAAGACTACACCAGGGCGCTGATGGCCGCCGCCTTCAATCTCGAAG CCGTCAACCTGTCCGCCATCCGTCAGTAG Protein sequence : MTDTLLSVRDLSVAFHQGGDTSVAVDHISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLK ASNAELRHVRGNDITMIFQEPMTSLNPLHTIEQQIGEILELHQDLKGPAARARTLELLNQVGIREAEKRLGAYPHQLSGG QRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDQHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGP TAEIFANPQHSYTRHLLASEPKGEPPLSDQSKPIVVEGKDVKVWFPINAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGE SGSGKTTLGLALTRLISSKGRIAFVGQDIDAYSFGEMRPLRNRMQVVFQDPYGSLSPRMSVADIIGEGLKIHERTLSDDA RDARVAAALQEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYL FISHDLKVVRALANEVIVMRLGKVVEQGPAERIFEAPAEDYTRALMAAAFNLEAVNLSAIRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-98 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-84 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-84 | 41 |
