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Name : deoA (NGR_c34550) Accession : YP_002827932.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 3663099 - 3664415 bp Length : 1317 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGGCCCTGCTTCCCCAGGAAGTGATCCGGAAGAAGCGGGACGGCGGTCGGCTCGACCGAGCGGAGATAGCCGACTTCGT CAGCGGTCTCGCCGACGGCTCGATCTCGGAAGGGCAGGTCGCCGCCTTCGCCATGGCCACCTGGTTCTCCGGCATGAACC GCGACGAATGCGTGGCGCTGACGCTGGCGATGCGCGATTCCGGCGACATCCTCGACTGGAGCGAGTTCGGCCGCCCCATC GTCGACAAGCATTCGACCGGCGGCGTCGGCGACAATGTCTCGCTGATGCTGGCGCCGATCGTGGCCGCCTGCGGCCCCAA CGTGCCGATGATCTCCGGGCGAGGCCTCGGTCACACCGGCGGCACGCTCGACAAGCTCGAATCGATCCCGGGCTACAACA TCCAGCCGTCGCCCGAACTGTTTCGCCAGATCGTCGATGAGGTCGGCTGCGCCATCATCGGCCAGACCGCCAATCTCGCA CCGGCCGACAAGCGCCTCTACGCGATCCGCGACGTGACCGCGACGGTCGATTCGGTGCCGCTGATCACCGCGTCGATCCT GTCGAAAAAACTCGCCGCCGGGCTTCAGTCGCTGGTGCTGGACGTCAAGCTCGGCAATGGGTCCTTCATGACCGATGCGC GAGCGACCAAGACCCTGGCGCGCTCGCTCGTCGACGTCGCAAATGGGGCAGGGGTGAACACCTTGGCGCTGATCACCGAC ATGAACGAGCCGCTCGCGGACGCGGTCGGAAATGCGCTGGAAGTCGAGAACTGCCTTGCCTATCTGCGCGGCGAAAAGTC GGGAACCCGCCTCGACCAGGTGGTGATGGCTTTCGCGGCGGAAATGCTCGTCGCGGCGAGGATGGCGGCGCACCCGGCTG CAGGCGAAGCCATGGCTCGTCAAGCTCTGGAGAGTGGCGACGCGATGGAACGCTTCGCCCTTATGGTGCATCGGCTCGGG GGACCCGCCGATTTCGTCGATCGATCCGAAGCCTACCTCGAAAAGGCACCGGCCGTCGTCATCGTGCCTGCCAACCGCGA CGGCTATCTCGCCGCATGCGAGACGCGTGAGCTGGGGATGGCCGTCATTGCGCTCGGCGGCGGGCGGACGCGACCGGACG ACCGGATCGATCATCGGGTGGGACTTGCCGGCCTCAAACCGCTGGGGACAAAGGTCGAGAGGGGCGAACCGATCGCCTTT GTGCATGCCGCCGACCGGCAGCAGGCCGAAGCGGTGAGAGACAGGATTGCCGGGTTCTATGCGATTGCCGACGAGCGGCC CGCCTCGCGCCCCGTGATCGTTTCGAGAATTACCTGA Protein sequence : MALLPQEVIRKKRDGGRLDRAEIADFVSGLADGSISEGQVAAFAMATWFSGMNRDECVALTLAMRDSGDILDWSEFGRPI VDKHSTGGVGDNVSLMLAPIVAACGPNVPMISGRGLGHTGGTLDKLESIPGYNIQPSPELFRQIVDEVGCAIIGQTANLA PADKRLYAIRDVTATVDSVPLITASILSKKLAAGLQSLVLDVKLGNGSFMTDARATKTLARSLVDVANGAGVNTLALITD MNEPLADAVGNALEVENCLAYLRGEKSGTRLDQVVMAFAAEMLVAARMAAHPAAGEAMARQALESGDAMERFALMVHRLG GPADFVDRSEAYLEKAPAVVIVPANRDGYLAACETRELGMAVIALGGGRTRPDDRIDHRVGLAGLKPLGTKVERGEPIAF VHAADRQQAEAVRDRIAGFYAIADERPASRPVIVSRIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-67 | 42 |
