Gene Information

Name : NGR_c34490 (NGR_c34490)
Accession : YP_002827926.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Resistance
Product : heavy metal -(Cd/Co/Hg/Pb/Zn)- translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3655446 - 3657689 bp
Length : 2244 bp
Strand : +
Note : -

DNA sequence :
ATGACAGGTCCGGTTCGGGAAAGCAGGTATCGCGTCGAAGGCATGGATTGCGCGTCCTGCGCGGCGAAGATCGACACCGC
CGTCAGGCGGGTCGTCGGCGTCGAAGGCGTCAGCGTGTCGGTGAGCGCGGCCACAATGACCGTGCGGCATGCCGGAAACG
ACGATGTCGGTCCGGCAATCAGGCGCAAGGTTGCGGGGCTCGGCTACGGGCTTTCGCCCTTGGCCGGCGACGCGTCACCA
AGTATGCCTCCGGGCGATCACGCTTGCTGCGGCCATGCGCATGGCGCGACGGGTGGTGACCATCACCGACACGATGTGCC
GTCCGCACGTCTCGAAGTCCCCCCGATCATTGGCGTCGCGAATCGTGAGCGGCGCATGGAGCGTTGGTGGCAAACGAGAA
AGGGCCGGCTGACGATTGCCTGCGGCATCGCGCTTGCCGGTGCCTACGGCATCGGTAAGCTCTTACCCGCGACCGAGCCC
TGGATCTTCACCCTTGCCATGCTTGTCGGCCTGCTGCCGATCGCCAGGCGTGCGGTCATGGCCGCCCTCAACGGCACGCC
GTTTTCCATCGAGATGCTGATGACCATCGCAGCCGCCGGCGCGGTTTTCATCGGCGCCGCCGAGGAGGCGGCGATGGTCG
TGTTTCTCTGCCTGATCGGTGAGCTGCTGGAGGGGATCGCCGCCGGCAAGGCCCGTGCGAGCATCGAGGCGCTCACCGCA
CTTGTGCCGAAAACCGCGCTCATGGAGGCCGATGGCCGTATGACCGAGGTTCCGGCGGAAAGCCTGCCGGTCGGCGCCAC
AATTCTGGTTCGCCCCGGCGACCGGCTCGCCGCCGACGGCGTGATCCTCACCGGCGAGAGCGGCATCGACGAGGCGCCGG
TGACCGGCGAGAGCGCGCCCGTTAAGAAAGGTCCCGGCGACAACGCCTTTGCCGGCACGGTCAACGGCGACGGGGCCCTA
CGGCTGCGTGTCACCGCGGCTGCCGCCGATAACACCATCGCCCGGGTCATCAGGCTGGTCGAGGAGGCGCAGGAGACGAA
GGCGCCGACGGAGCGGTTCATCGACCGGTTCTCGCGCGGCTATACGCCGGCCGTCGCCCTCGTCGCGGCACTCGTTGCGA
CCGTACCGCCGCTTTTCCTCGGCGGTCCGTGGCAGGAGTGGATCTACAAGGGGCTCGCGCTTCTGTTGATCGGCTGCCCC
TGCGCCCTCGTCATTTCCACACCGGCGGCGATCGCCGCGAGCCTTTCTGCCGGTGCCCGCCGTGGCCTGCTTATCAAGGG
CGGCGCCGTGCTCGAAACTGTCGGCAAGGTCACCGCCGTCGCCTTCGACAAGACCGGCACGCTGACCGAAGGTAAGCCGA
AAGTGACGGATATTCTCGGGTTCGGCTGGACCGAGGCGGACGTTCTCCGCCATGCGGCCGTCCTCGAACAGGGCTCCAGC
CATCCGCTGGCGCAGGCGATCCTGTCCCGCGCCGAGGCCGGTGGAATTGCCTTGCCGGCCGTTTCGGAGATCAAGGCCCT
CGGCGGCAAGGGCATCAGCGGCAGGGTGGCGGGCGCAGACCTCTTTCTCGGCTCGCCGCAAGAGGCTGGCCGCCGGGCGC
CTTTGACGGCCGATGAGCAGGCTCAGGTGGCGGCATTGCACGATAAAGGCAAGACCGTTTCGGTGTTGATCGCCGATGGT
CGTGCCGCCGGCGCGCTCGCGATGCGCGACGAGCCGCGCGCCGATGCCGTAACCGGTGTGAAGGCGCTGGCCGACAGCGG
CCTCCGCGTCCTCATGCTCACCGGCGACAACCGGCGCACTGCCGAAGCCATTGCCGGGCGGCTCGGGATCGAGGCGCGCG
CCGAACTCCTGCCGGAAGACAAGCAGCGCATCGTCGGCGAATTGAAGGGCGAAGGATATGTGGTCGCCAAGGTCGGCGAC
GGCATCAACGACGCGCCGGCACTGGCGGCGGCCGATGTCGGCATCGCGGTCGGCGGCGGCACCGATGTGGCGCTGGAGAC
GGCCGACGCCGCCAGTCTTCACGGGCGTGTCTCGGATATCGCCGCGATGGTGAGGCTGTCGCGGCGGACGATGCGCAATA
TCCACCAGAACATCGCGATCGCGCTCGGCCTCAAGGCGGTCTTTCTGGTGACCACGATCGCCGGTGTGACCGGCCTCTGG
CCGGCGATCCTCGCCGACACCGGCGCCACCGTCCTGGTGACGATCAACGCGCTGAGGCTGCTGCGGGCGCCTGCGAAGGC
ATAG

Protein sequence :
MTGPVRESRYRVEGMDCASCAAKIDTAVRRVVGVEGVSVSVSAATMTVRHAGNDDVGPAIRRKVAGLGYGLSPLAGDASP
SMPPGDHACCGHAHGATGGDHHRHDVPSARLEVPPIIGVANRERRMERWWQTRKGRLTIACGIALAGAYGIGKLLPATEP
WIFTLAMLVGLLPIARRAVMAALNGTPFSIEMLMTIAAAGAVFIGAAEEAAMVVFLCLIGELLEGIAAGKARASIEALTA
LVPKTALMEADGRMTEVPAESLPVGATILVRPGDRLAADGVILTGESGIDEAPVTGESAPVKKGPGDNAFAGTVNGDGAL
RLRVTAAAADNTIARVIRLVEEAQETKAPTERFIDRFSRGYTPAVALVAALVATVPPLFLGGPWQEWIYKGLALLLIGCP
CALVISTPAAIAASLSAGARRGLLIKGGAVLETVGKVTAVAFDKTGTLTEGKPKVTDILGFGWTEADVLRHAAVLEQGSS
HPLAQAILSRAEAGGIALPAVSEIKALGGKGISGRVAGADLFLGSPQEAGRRAPLTADEQAQVAALHDKGKTVSVLIADG
RAAGALAMRDEPRADAVTGVKALADSGLRVLMLTGDNRRTAEAIAGRLGIEARAELLPEDKQRIVGELKGEGYVVAKVGD
GINDAPALAAADVGIAVGGGTDVALETADAASLHGRVSDIAAMVRLSRRTMRNIHQNIAIALGLKAVFLVTTIAGVTGLW
PAILADTGATVLVTINALRLLRAPAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-84 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c34490 YP_002827926.1 heavy metal -(Cd/Co/Hg/Pb/Zn)- translocating P-type ATPase BAC0461 Protein 3e-99 53