Gene Information

Name : NGR_c32630 (NGR_c32630)
Accession : YP_002827747.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Resistance
Product : thiamine ABC transporter ATP-binding protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG3840
EC number : -
Position : 3420126 - 3420875 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTTCGCTTGCCCTGTCGCTCAAGGACGTCAAGGTTCGTTTCGAAACGACGACGCTGGCGTTCGATTGCGCGGTTTC
GGCCGGTCAGATCGTCGCGGTCATTGGCCCCTCCGGCTCGGGAAAATCGACGCTTTTCAACGTCATCGCCGGCTTCGAGA
CGCCGGAAGCGGGCGAAGTGCGAATCCTCGGCGAAGACACGGCCGGGCGCATGCCGGCGGATCGCCCGGTGTCCTTCATT
TTCCAGGAAAACAATCTCTTCGCCCATCTCGATGTCGCGACCAATATCGGCCTCGGGATCAGCCCGTCGCTCAGCCTCGC
CCCGTCCGATCGGCAAAGGATCGACGAGGCGCTGGGGCGGGTCGGGCTCGCCGGTTTTGGCAAGCGCTTGCCGCCGACGC
TTTCCGGCGGCGAGCGCCAGCGGGTGGCGCTTGCCCGCGCGCTGGTGCGGCACCGGCCGCTATTGCTGCTCGACGAACCT
TTCGCCGCGCTCGATCCTGGCATGCGCGCAGAGATGCGCGCCCTGCTGAGCGAGCTTCACGCCGAGGAAGGCAACACCAT
TCTGATGATCACGCATCATCCCGAAGACGTGAGGAGTCTCGCCGACAGCGTGCTTTTCCTCGACCAGGGGCGTATCGTCG
CCCATGACGCTCTGGACCGCTTTCTGGCGCGGCGCGACCTTAAGGCGGTCAACCGGTTTCTCGGCAACGAGGAGGATCAG
GTGAGGCAATGGCGTCCTTCGACCCGGTGA

Protein sequence : 
MSSLALSLKDVKVRFETTTLAFDCAVSAGQIVAVIGPSGSGKSTLFNVIAGFETPEAGEVRILGEDTAGRMPADRPVSFI
FQENNLFAHLDVATNIGLGISPSLSLAPSDRQRIDEALGRVGLAGFGKRLPPTLSGGERQRVALARALVRHRPLLLLDEP
FAALDPGMRAEMRALLSELHAEEGNTILMITHHPEDVRSLADSVLFLDQGRIVAHDALDRFLARRDLKAVNRFLGNEEDQ
VRQWRPSTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-15 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-15 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c32630 YP_002827747.1 thiamine ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-12 41