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Name : lpdA1 (NGR_c31220) Accession : YP_002827610.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 3281001 - 3282407 bp Length : 1407 bp Strand : - Note : Catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGCTTATGATCTCATCGTTATCGGCAGCGGTCCCGGCGGCTATGTCTGCGCCATCAAGGCGGCGCAGCTGGGCATGAA GGTCGCCGTGATCGAAAAGCGCAGCACCTATGGCGGCACCTGCCTCAATGTCGGCTGCATTCCCTCCAAGGCGCTGCTGC ATGCTTCCGAGATGTTCCACCACGCCGCGCACGGGCTCGATGCGCTCGGCGTCGAGGTCGCAAGCCCGAAGCTCAACCTT CAGAAGATGCTCGCCCACAAGGACGCCACCGTTAAGGCGAATGTCGACGGCGTCGCCTTCCTCTTCAAGAAGAACAAGAT CGACGGCTTCCAGGGCATCGGCAAGGTGCTCGGCCAGGGCAAGGTCTCCGTCACCAACGACAAGGGCGAGGAGCAGGTCC TCGAAGCCAAGAACATCGTCATCGCCACCGGCTCGGACGTTGCAGGCATTCCCGGCGTCGAGGTCGAATTCGACGAAAAG GTCATCATCTCGTCCACCGGCGCTCTCGAGCTGGAGAAGGTCCCGGCCAGCATGGTCGTCGTCGGCGGCGGCGTCATCGG CCTCGAGCTCGGCTCGGTCTGGGCGCGCCTCGGCGCCAAGGTGACTGTCGTCGAGTTCCTCGACACGATCCTCGGCGGCA TGGACGGCGAAGTCGCCAAGCAACTCCAGCGGATGCTGGCGAAGCAGGGCATCGACTTCAAGCTCGGCGCTAAGGTGACC GGCGTCGTGAAGTCCGCCGGTGGCGCAAAAGTGACCTTCGAACCGGTCAAGGGCGGCGATGCGAGCACCCTCGAGGCGGA GGTGGTGCTGGTCGCGACGGGCCGCAAGCCCTGCACGGACAATATGGGCCTTGCGAAGGCCGGCGTCGTCCTCGACTCGC GCGGCCGGGTCGAGATCGACCACCATTTCCAGACGAGCATCGCCGGTGTCTACGCGATCGGCGACGTGGTGCGCGGGCCG ATGCTCGCCCACAAGGCGGAGGACGAAGGCGTCGCCGTCGCAGAGATCATCGCCGGACAGGCGGGCCACGTGAACTACGA CGTCATTCCGGGCGTCGTCTACACCCAGCCGGAGGTCGCCTCCGTCGGCAAGACCGAGGAGGAACTGAAGGCCGCCGGCG TCGCCTACAAGGTCGGCAAGTTCCCCTTCACCGCCAATGGCCGCGCCCGCGCCATGCTGCAGACCGACGGTTTCGTGAAG ATCCTCGCCGACAAGGAGACCGACCGGGTGCTCGGCGGCCACATCATCGGCTTCGGTGCCGGCGAGATGATCCACGAGAT TACCGTGCTGATGGAGTTCGGCGGATCGTCGGAAGACCTCGGCCGCACCTGCCATGCACACCCGACCATGTCGGAAGCGG TGAAGGAAGCGGCGCTCGCGACCTTCTTCAAGCCGATCCACATGTGA Protein sequence : MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVIEKRSTYGGTCLNVGCIPSKALLHASEMFHHAAHGLDALGVEVASPKLNL QKMLAHKDATVKANVDGVAFLFKKNKIDGFQGIGKVLGQGKVSVTNDKGEEQVLEAKNIVIATGSDVAGIPGVEVEFDEK VIISSTGALELEKVPASMVVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMDGEVAKQLQRMLAKQGIDFKLGAKVT GVVKSAGGAKVTFEPVKGGDASTLEAEVVLVATGRKPCTDNMGLAKAGVVLDSRGRVEIDHHFQTSIAGVYAIGDVVRGP MLAHKAEDEGVAVAEIIAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGVAYKVGKFPFTANGRARAMLQTDGFVK ILADKETDRVLGGHIIGFGAGEMIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-63 | 42 |
