Gene Information

Name : NGR_c31030 (NGR_c31030)
Accession : YP_002827591.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : iron transport protein, ATP-binding component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3260355 - 3261284 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCTCCAGGTAAAGGCCCGACCTAGCCCGCGGCCGGGCTCCCAGGGCGAAGGAAGCGGCATTCGGGTCCGCAATGC
CACCGTCACCTATCGCAACGGGCACCGCGCGCTGCATGATGCGTCCTTCGAGATTCCGACCGGCACGATCGCCGCCCTGG
TCGGCGTCAACGGCAGCGGCAAGTCGACGCTGTTCAAGGCCATCATGGGCTTCGTCCGGTTGGCGAAAGGCGATATCTCG
GTCCTCGGCCTCACCGTGCCGCAGGCGCTGAAGAAGAACCTCGTCGCCTATGTCCCGCAGGCCGAGGAGGTCGACTGGAA
TTTCCCCGTCCTCGTCGAGGATGTGGTGATGATGGGCCGTTACGGCCACATGAACATGCTGCGCATCCCGAAACGGGCCG
ACCACGAGGCGGTCGAGGCGGCGCTGGCGCGGGTCGGAATGAGCGACTTCCGCAAGCGCCAGATCGGCGAGCTTTCCGGC
GGCCAGAAGAAGCGCGTCTTCCTCGCCCGGGCGCTTGCCCAGGACGGACGCGTCATCCTGCTCGACGAACCCTTCACCGG
CGTCGACGTGAAGACCGAAGATGCGATCATCCGCCTGCTCCTCGCGCTTCGCGACGAGGGGCGCGTCATGCTCGTCTCCA
CCCACAATCTCGGCAGCGTCCCTGAATTCTGCGACCGGACCGTGCTCCTGAAGAACACCGTTCTCGCCTACGGCCCGACC
GAGACCACCTTCACCCGCGACAATCTCGAACTCGCCTTCGGCGGCGTGCTGCGTCATTTCGTGCTCGGCGGCGACAGCCT
GCACGACGATGCCGATCCGCGCCAGCTTTCCGTCATCACCGATGACGAGCGACCGCTGGTCATGTACGGCGCGAAGGGAA
AAATGGTGACGCAGCCAGCCAAGCTCGAGACCGAGGCGGACAGCGAATGA

Protein sequence : 
MNLQVKARPSPRPGSQGEGSGIRVRNATVTYRNGHRALHDASFEIPTGTIAALVGVNGSGKSTLFKAIMGFVRLAKGDIS
VLGLTVPQALKKNLVAYVPQAEEVDWNFPVLVEDVVMMGRYGHMNMLRIPKRADHEAVEAALARVGMSDFRKRQIGELSG
GQKKRVFLARALAQDGRVILLDEPFTGVDVKTEDAIIRLLLALRDEGRVMLVSTHNLGSVPEFCDRTVLLKNTVLAYGPT
ETTFTRDNLELAFGGVLRHFVLGGDSLHDDADPRQLSVITDDERPLVMYGAKGKMVTQPAKLETEADSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-91 73
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-91 73
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-90 73
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-90 73
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-90 73

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c31030 YP_002827591.1 iron transport protein, ATP-binding component BAC0350 Protein 2e-90 73
NGR_c31030 YP_002827591.1 iron transport protein, ATP-binding component BAC0440 Protein 2e-90 69
NGR_c31030 YP_002827591.1 iron transport protein, ATP-binding component BAC0400 Protein 2e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c31030 YP_002827591.1 iron transport protein, ATP-binding component VFG0526 Protein 2e-90 73