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Name : lpdA2 (NGR_c29920) Accession : YP_002827488.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 3138508 - 3139902 bp Length : 1395 bp Strand : + Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : GTGAAGGAAATTTCCTGCAAGCTCCTGGTGCTCGGCGCCGGCCCCGGCGGCTATGTCTGCGCCATCCGGGCCGGACAACT CGGCGTCAACACCGTGATCGTCGAGAAGGCGAAGGCGGGCGGCACCTGCCTCAATGTCGGCTGCATCCCCTCGAAGGCGC TGATCCATGCGGCCGAGGAATTTCACAAGCTGCGCGCCGTCGCCTCCGGAAAAAGCCCGCTCGGCCTCTCGCTTGAGGCC CCGGCGATCGACCTCGAGCGAACGGTCGCCTGGAAGGACGGCATTGTCGGCCGCCTGAACAGCGGCGTGACAGGGCTTCT GAAGAAGGCCGGCGTCAAGGCCGTTATCGGTCAAGCGCGCTTCGTCGACGGAAAGACGGTGGATGTGGAAACCGAAATCG GCGTCCAGCGCATTCGCGCCGAAGCGATCGTCATCGCCACCGGTTCGGCTCCGGTCGAGCTTCCCGACCTGCCTTTCGGC GACAATGTCATCTCCTCGACCGAGGCGCTGGCTTTGAAGGAAGTGCCGCAGACGCTCGCCGTCATCGGCGGCGGCTATAT CGGCCTCGAACTCGGCACCGCCTTCGCCAAGCTCGGCTCGAAGGTCACCGTGCTCGAAGCGATGGACCGCATCCTGCCGC AATATGACGCCGACCTGTCGAAGCCGGTGATGAAGCGGCTCGGCGAACTCGGCATCGACGTCTTCACCCGCACCGCAGCC AAGCGCCTGTCGGCGGATCGGCGCGGCTTGCTTGCCGAGGAAAACGGCCGCGCCTTCGAGGTGGCGGCGGAGAAGGTTCT GGTCACCGTCGGTCGTCGGCCCGTGGTCGAGGGCTGGGGGCTGGAGGAGATCGATCTCGACCGTTCGGGCAAGTTCATCC GCATCGACGACCAATGCCGCACCTCGATGCGCGGCATCTATGCGATCGGCGATGTCACCGGCGAACCGATGCTCGCCCAT CGCGCCATGGCGCAGGGCGAGATGGTCGCGGAGATCGTCGCCGGCCAGAAGCGCAGCTGGGACAAGCGCTGCATCCCGGC CGTCTGCTTCACTGACCCGGAGATTGTCAGCGCCGGTCTCTCGCCGGAGGAGGCGCGCGCGGCCGGCATCGAGATCAAGA TCGGCCAGTTCCCCTTCCAGGCGAACGGCCGTGCCATGACGACGCTTGCCGAGGATGGCTTCGTCCGCATCGTCGCCCGC GCCGACAACCACCTCGTCCTCGGCATCCACGCCGTCGGGCATGCGGTCTCCGAGCTTTCCTCCGCCTTTGCGCTCGCCAT CGAAATGGGTGCGCGTCTCGAGGATATCGCCGGCACGATCCACGCCCATCCGACGCAGTCGGAGGCCTTCCAGGAAGCGG CCTTGAAGGGGCTGGGGCACGCGCTGCATATCTGA Protein sequence : MKEISCKLLVLGAGPGGYVCAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEEFHKLRAVASGKSPLGLSLEA PAIDLERTVAWKDGIVGRLNSGVTGLLKKAGVKAVIGQARFVDGKTVDVETEIGVQRIRAEAIVIATGSAPVELPDLPFG DNVISSTEALALKEVPQTLAVIGGGYIGLELGTAFAKLGSKVTVLEAMDRILPQYDADLSKPVMKRLGELGIDVFTRTAA KRLSADRRGLLAEENGRAFEVAAEKVLVTVGRRPVVEGWGLEEIDLDRSGKFIRIDDQCRTSMRGIYAIGDVTGEPMLAH RAMAQGEMVAEIVAGQKRSWDKRCIPAVCFTDPEIVSAGLSPEEARAAGIEIKIGQFPFQANGRAMTTLAEDGFVRIVAR ADNHLVLGIHAVGHAVSELSSAFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKGLGHALHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-83 | 44 |
