Gene Information

Name : fliP (NGR_c02830)
Accession : YP_002824834.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 321007 - 321744 bp
Length : 738 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGCTCCGGATTGCTGCCTTCATAGTCGCCATGATGGCGATGTCGGGAATTGCCGGGGCGCAGAGCTTTCCCGCCGATAT
TCTGAACACGCCGGTCGATGGTTCGGTCGCCTCCTGGATCATCCGCACATTCGGGCTGTTGACCGTCCTTTCGGTCGCCC
CGGGCATCCTGATCATGGTGACGAGCTTTCCCCGTTTCGTCATCGCCTTTGCGATCCTGCGCTCGGGCATGGGGCTTGCG
ACCACACCGTCGAACATGATCATGGTGTCGCTGGCGCTGTTCATGACCTTCTACGTGATGGCGCCCACCTTCGACCGCGC
CTGGCGCGAGGGCATCGATCCGCTGTTGAAGAACGAGATTTCCGAGACCGAGGCGCTGCCGCGGGTATCCGAGCCGTTCC
GTGAGTTCATGCTCGCCAACACGCGCGACAAGGACCTGCAGCTCTTCATCGACATCGCCCGCGAGAAGGGCCAGACCGTC
GTCGTCGACGACAAGGTCGATCTGCGCGCCGTCGTGCCGGCCTTCATGATTTCGGAGATCCGCCGCGGCTTCGAGATCGG
CTTCCTGATCATGCTGCCCTTCCTGGTCATCGATCTCATCGTCTCGACCATCACCATGGCGATGGGCATGATGATGCTGC
CGCCGACGTCGATCTCGCTGCCCTTCAAGATCCTGTTCTTCGTGCTGATCGACGGCTGGAACCTGCTCGTCGGCAGTCTG
GTGCGCTCCTTCACTTAA

Protein sequence : 
MLRIAAFIVAMMAMSGIAGAQSFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFAILRSGMGLA
TTPSNMIMVSLALFMTFYVMAPTFDRAWREGIDPLLKNEISETEALPRVSEPFREFMLANTRDKDLQLFIDIAREKGQTV
VVDDKVDLRAVVPAFMISEIRRGFEIGFLIMLPFLVIDLIVSTITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-49 48
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-48 45
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG2338 Protein 5e-47 43
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG2016 Protein 7e-48 43
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG0188 Protein 6e-31 41
fliP YP_002824834.1 flagellar biosynthesis protein FliP VFG0394 Protein 7e-31 41