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Name : NGR_c28060 (NGR_c28060) Accession : YP_002827305.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2923594 - 2925570 bp Length : 1977 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGATCTCTCGCGAAAAACACGACCGGATGGCGAATGCAATCCGTTTCCTCTCCATGGACGCCGTCGAGAAGGCAAATTC CGGCCACCCAGGTCTCCCGATGGGCGCGGCCGACATAGCAACGGTCCTCTTCACTCGTTACCTCAGCTTCGACCCGAAGA ACCCCGCCTGGCCGAACCGCGACCGCTTCGTGCTGTCGGCCGGCCACGGCTCGATGCTGCTCTATTCGCTGCTCTATTTG ACCGGCTACGAAGACATCACCATCGACGAGATCAGGAATTTCCGCCAGCTCGGCTCGAAGACGGCGGGCCATCCGGAATA CGGCCATGCCGCCGGCATCGAGACGACGACCGGCCCGCTCGGCCAGGGCATTGCCAACGCCGTCGGCATGGCGCTCGCCG AGCGCAAGCTGCGCGACGAGTTCGGCAGCGACCTGATCGAGCACTACACCTATGTGATCGCCGGCGACGGCTGCCTGATG GAAGGCATCAGCCAGGAGGCGATCGCGCTTGCCGGCCATCTGAAGCTCAACAAGCTCATCGTCTTCTGGGACGACAACAA CATCTCGATCGACGGACCGATCTCGATCGCCGACTCGACCGACCAGCATGCCCGCTTCCGTGCCTCCAAATGGCACACCA TCGCCGTCGACGGCCATGATCCGGAGGCGATCGCCGCCGCGATCGAGGAAGCGCAGAAGTCCGACAAGCCGACGATGATC GCCTGCAAGACCGTCATCGGCTTCGGCGCCCCGAACAAGGCCGGCACCCACAAGGTGCATGGCTCGCCGCTCGGCGCCGA GGAAATCGCCGCGACCCGCAAGGCGCTCGGCTGGGAAGCCGAGGCCTTCACCGTTCCGGCCGACGTGCTCGACGCCTGGC GTCTTGCCGGCCAACGCTCGGCGGAAACCCGCAAGGCATGGGAAGAAACCCTCCAAACTGCCGAGAAGAAGGCCGAATTC GTGCGCCGTTTCTCCGGCGAACTCGAGGCCGGCCTCGCCCCGGCAATCAGCGCCTACAAGCAGAAGCTCGCCGAGACGAA GCCGTCGCCGGCGACCCGCAAGGCTTCCGAGGATGCGCTGGAAGTCATCAACGGCGTACTCAACGAGACGATCGGCGGCT CGGCCGACCTGACCGGTTCCAACAACACCAAGACGAGCCAGACCCATTCGATCACGCCGGACAATTTCTCCGGCCGCTAC GTCCACTACGGCGTCCGCGAGCACGGCATGGCCGCCGCCATGAACGGCATGGCGCTGCACGGCGGCGTGATCCCCTATTC CGGCGGCTTCCTGATCTTCTCGGACTATTGCCGTCCGTCGATCCGCCTCGCCGCCCTGATGGGCATCCGCGTCATTCACG TGCTCACCCACGACTCCATCGGTCTCGGCGAGGATGGTCCGACGCACCAGCCGGTCGAGCATCTGGCCGCCCTGCGCGCC ATCCCCAACCTCCTGGTGTTCCGCCCGGCCGACGCGACCGAAACGGCCGAATGCTGGCAGCTGGCGCTTGAGAGCAAGAA GCGCCCGTCCGCCATCGCGCTGACGCGCCAGAACCTCATGGCGGTGCGCACCGAATACAAGGAAGTGAACCTCTGCGCCC GCGGCGCCTATGACCTGATCCCGGCGAGCGACGCCAAGGTGACGATCTTCGCCACCGGCTCGGAAGTCGAAATCGCCGTC AAGGCAAGCCAGGCGCTGACGGAGAAGGGCATCTCGACGCGTGTCGTTTCCGTGCCCTGCATCGAGCTTTTCGCCGAGCA GAGCGACGACTATCAGCAGGCGGTCATCGGCAAGTCGCCGGTCAAGATCGCCATCGAAGCCGGCGTCCGCCAGGGCTGGG ACCATATCATCGGCAGCGACGGCACCTTCGTCGGCATGTCGAGCTTCGGTGCCTCCGGTCCCTACAAGGAGCTCTACAAG CACTTCGGCATCACGCCGGAAGCGGTTGTCGCGGCCGCCGAAGCCAAGCTGTCCTGA Protein sequence : MISREKHDRMANAIRFLSMDAVEKANSGHPGLPMGAADIATVLFTRYLSFDPKNPAWPNRDRFVLSAGHGSMLLYSLLYL TGYEDITIDEIRNFRQLGSKTAGHPEYGHAAGIETTTGPLGQGIANAVGMALAERKLRDEFGSDLIEHYTYVIAGDGCLM EGISQEAIALAGHLKLNKLIVFWDDNNISIDGPISIADSTDQHARFRASKWHTIAVDGHDPEAIAAAIEEAQKSDKPTMI ACKTVIGFGAPNKAGTHKVHGSPLGAEEIAATRKALGWEAEAFTVPADVLDAWRLAGQRSAETRKAWEETLQTAEKKAEF VRRFSGELEAGLAPAISAYKQKLAETKPSPATRKASEDALEVINGVLNETIGGSADLTGSNNTKTSQTHSITPDNFSGRY VHYGVREHGMAAAMNGMALHGGVIPYSGGFLIFSDYCRPSIRLAALMGIRVIHVLTHDSIGLGEDGPTHQPVEHLAALRA IPNLLVFRPADATETAECWQLALESKKRPSAIALTRQNLMAVRTEYKEVNLCARGAYDLIPASDAKVTIFATGSEVEIAV KASQALTEKGISTRVVSVPCIELFAEQSDDYQQAVIGKSPVKIAIEAGVRQGWDHIIGSDGTFVGMSSFGASGPYKELYK HFGITPEAVVAAAEAKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-153 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-152 | 51 |
