Gene Information

Name : NGR_c27420 (NGR_c27420)
Accession : YP_002827244.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline transport ATP binding subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 2857307 - 2858134 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGATATCGAAATCCGCAACGTCTACAAAATCTTCGGGCATGACGCGAAGACGGCGCTTGCCATGGCCAAGGATGG
CCTGGACAAGGCCGATATCCTTGCCCGAACCGCCTGCAGCGTCGGTCTCAACGACGTCAGCCTGAAGATCGGCGCCGGCA
AGATCTTCGTGATCATGGGCCTTTCCGGGTCCGGCAAGTCGACCCTGGTGCGCCACATCAACCGGTTGATCGAGCCGACG
AGCGGCGAGGTCGTGTTCGACGGCAGCAACATCCTCGATCTCGACGCCAAGGCACTGCGCGCCTTCCGCATGCGGCGCGT
CAGCATGGTCTTCCAGAGCTTCGCCCTGATGCCGCACCGGACCGTGCTGCAGAATGTCGTCTACGGCCAGCGCGTGCGCG
GCGTCTCGAAGGCCGACGCCCGCGAGATCGGCATGAAATGGATCGAGACGGTCGGCCTCTCGGGTTATGACGCGAAATTC
CCGCATCAGCTCTCCGGGGGCATGAAGCAGCGCGTCGGCCTTGCGCGGGCGCTCGCCGCGGATACCGACGTGATCCTGAT
GGACGAGGCCTTCAGCGCGCTCGATCCGCTGATCCGCAGCGATATGCAGGATCAGTTGCTGCAACTGCAGCAGAATCTCG
CAAAGACCATCGTCTTCATCACCCACGACCTCGACGAGGCGCTGCGGATCGGATCCGAAATTGCGATCCTGAAGGACGGT
CAGGTCGTGCAGGTCGGCTCGCCCGGTGATATTCTCGACAATCCGGCAAACGACTATGTCGCGCGCTTCGTCCAGCGCCG
GCAGGGAAGACCCGAGAAGCATGGTTGA

Protein sequence :
MADIEIRNVYKIFGHDAKTALAMAKDGLDKADILARTACSVGLNDVSLKIGAGKIFVIMGLSGSGKSTLVRHINRLIEPT
SGEVVFDGSNILDLDAKALRAFRMRRVSMVFQSFALMPHRTVLQNVVYGQRVRGVSKADAREIGMKWIETVGLSGYDAKF
PHQLSGGMKQRVGLARALAADTDVILMDEAFSALDPLIRSDMQDQLLQLQQNLAKTIVFITHDLDEALRIGSEIAILKDG
QVVQVGSPGDILDNPANDYVARFVQRRQGRPEKHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-35 45
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-35 45