Gene Information

Name : NGR_c23150 (NGR_c23150)
Accession : YP_002826827.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase 2
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 2402003 - 2403511 bp
Length : 1509 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCATCAGAAAATTCTCGATAACCCGTTCAAGCACAAGTATGGAAATTTCATCGGCGGTGAATGGCGCGAGCCGGT
CGCCGGCCGCTATTTCGACAATACCACGCCTGTCACCGGCGGTTCGCTCTGCCAGATAGCCCGATCGGATGCCGCCGATA
TCGAGCTCGCACTCGATGCTGCCCATGCCGCCAAGGAGAAGTGGGGCCGCACCTCGACCACCGAGCGCTCCAACATCCTG
ATGAAGATCGCCGCGCGGATGGAGGACAATCTCGAACTTCTGGCGCGGGCCGAGACCTGGGACAACGGCAAACCGATCCG
CGAAACCATGGCCGCCGATATTCCGCTGGCGATCGACCATTTCCGCTATTTCGCCGCCTGCATCCGGGCACAGGAAGGCT
CGATCGGCGAGATCGACCACGATACGGTCGCCTACCATTTCCATGAGCCGCTCGGTGTCGTCGGCCAGATCATTCCGTGG
AACTTCCCGATCCTGATGGCCGCCTGGAAGGTGGCGCCGGCCCTTGCCGCCGGCAACTGCGTCGTCCTGAAGCCAGCCGA
GCAGACGCCGGCCTCGATCCTCATCCTCGCCGAATTGATCGCCGACCTGTTGCCGCCGGGCGTGCTCAACATCGTCAACG
GCTTCGGGCTCGAAGCGGGCAAGCCGCTGGCGACCAGCCCGCGCATCGCCAAGATCGCCTTTACCGGGGAGACGACGACG
GGGCGGCTGATCATGCAATATGCCAGCCAAAACCTCATCCCCGTCACACTCGAGCTCGGCGGCAAGTCGCCGAACATCTT
CTTCGCCGACGTGCTCAATGAGGACGACGACTATTTCGACAAAGCGCTCGAAGGCTTCGCGATGTTCGCGCTCAACCAGG
GCGAGGTCTGCACCTGCCCGAGCCGGGCGCTGGTCCAGGAAAGCATCTATGATCGCTTCATGGAGCGGGCGGTGAAGCGG
GTCGAGGCGATCCGGCAGGGCAATCCGCTCGACAGTGCAACGATGATCGGCGCGCAGGCGTCGGGCGAACAGTTGGAGAA
GATCCTCTCCTATATCGACATCGGCAAGCAGGAAGGCGCCGAGGTCCTGGCCGGCGGCGGGCGCAACGTGCTCGAGGGCG
ACCTCGCCGGTGGCTACTACGTCAAGCCGACGGTGTTCCGTGGGCACAACAAGATGCGGATCTTCCAGGAGGAAATCTTC
GGACCGGTCGTGTCGGTGACCACCTTCAAGACCGAGGACGAGGCGCTCGAGATCGCCAATGACACGCTCTACGGCCTCGG
TGCCGGCGTGTGGAGCCGCGACGCCAATCGCTGCTACCGCTTCGGCCGCGAAATCCAGGCCGGCCGCGTCTGGACCAATT
GCTACCATGCCTACCCGGCGCATGCCGCCTTCGGCGGCTACAAGCAATCGGGCATCGGCCGCGAGACGCACAAGATGATG
CTCGACCATTACCAGCAGACCAAGAACATGCTGGTGAGCTACAGCCCGAAGGCGCTCGGCTTCTTCTGA

Protein sequence :
MLHQKILDNPFKHKYGNFIGGEWREPVAGRYFDNTTPVTGGSLCQIARSDAADIELALDAAHAAKEKWGRTSTTERSNIL
MKIAARMEDNLELLARAETWDNGKPIRETMAADIPLAIDHFRYFAACIRAQEGSIGEIDHDTVAYHFHEPLGVVGQIIPW
NFPILMAAWKVAPALAAGNCVVLKPAEQTPASILILAELIADLLPPGVLNIVNGFGLEAGKPLATSPRIAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVLNEDDDYFDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMERAVKR
VEAIRQGNPLDSATMIGAQASGEQLEKILSYIDIGKQEGAEVLAGGGRNVLEGDLAGGYYVKPTVFRGHNKMRIFQEEIF
GPVVSVTTFKTEDEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LDHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-142 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 9e-148 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-147 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-63 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_c23150 YP_002826827.1 acetaldehyde dehydrogenase 2 VFG0082 Protein 2e-142 66