|
Name : NGR_c22340 (NGR_c22340) Accession : YP_002826747.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Unknown Product : transposase number 1 for insertion sequence NGRIS-3g Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2314945 - 2316495 bp Length : 1551 bp Strand : + Note : - DNA sequence : ATGCCGAGACGGAAGCAAGCAAGACGAACGACAGTGAGGGATATCCGGACTATTCTGCGCCTGACCCATGAAGAGGGTCT TTCGGTGCGCGAGATTGCCGAGCGGCTGAAGATCGGCAAGAGCTCGGTATCGACCTATTTGCTGCGATCTCGGGAAGCCG GGCTTTCGTGGCCGTTGCCAATCGGCGCGGACGAGGATGCAAAGCTGGAGCGGCGGCTGTTCGGCCGAGCCGGTCGACCG CCGCGCGATCTCAGCGAGCCGGACTGGGCGCTGGTGGTTCGGGAGCTGAAGCGCAAAGGCGTGACGCTGACGCTTCTATG GCAGGAATACCGCGCCAGCCATCCTGATGGTTACGGCTTCACCTGGTTCTGCGAGCAGGTTGCCGCCTTTCGGCAGCGCA CCAGTGTAGCGTTCCGCAATCGGCACGCGGCGGGCGCCGTGATGCAGACCGACTATGCCGGGCCGACGGTGCCGGTGATC GATCCGGCAACCGGTGTCATCCATCCGGCCCAAATCTTTGTCGCGGTGCTGGGCGCCTCCAACCTGACCTTCGCCCATGC CAGCTTTAGCCAGCAGTTGCCGGATTGGATCGACGGTCAGGTGCGTGCTCTGACCTTCTATGGTGGGGTCACCAAGGCAA TCGTGTGCGACAACCTCAAATCGGGGGTGGCCAAGGCCCTTTGGTTCGAGCCGACATTGACTGCGACGTTCGCCGCCATG GCGGAGCATTACGACACCACGATCCTGCCGACCCGCAGCAGGAAACCGCGCGACAAAGGCCGGGTCGAAGGCGCGGTATT GATCGTGGAACGCTGGATTCTGGCCCGGCTCAGGAACCGTACCTTCTTCTCGCTTGCCGCCCTCAACACGGCGATTGCCG AATTGCTCGAGGACCTGAACAACCGGACGATGCGCCATGTCGGCAAAAGCCGCCGCGAGCTGTTCGAGGAGATCGAGCGG CCAGCCTTGAAGCCCTTGCCGGCGATACCGTTCGAATATGCGGAATGGAAGTCGGCGAAGGTCCATCCGGACTATCATGT CGAGGTCGACAAGACCTTCTACTCGGTGCCGCATCGGCTGATCGGATGCACCCTCCAGGTGCGGCTCACCCACCGGGTGG TCGAGATCTTCCACGACCACCAGCGTGTCGCCAGCCATGTTCGCCGCTCCCAGCGTTCCGGCCACGTCACCGTCAACGAC CATATGCCCAAGGCGCATCAGCGCTATGCCAACACCACGCCGGCCAATCTGATCGGCCGTGCGACCCAGATCGGCCCCAA TGCCGCCATCCTGGTCGAACGCATGATGCGCGACAGGCCGCATCCGGAACAGGGATACCGCTCGGCCATGGGCATTCTGT CGCTGGCGCCGCGCTATGGATCCCAGCGCCTCGAGGCGGCCTGTGAGCGGGCGCTCACCATTAATGCCATCACCTATTCC TCCGTCGCCTCCATCCTCAAATCCGGCCTCGACCGGGAAAGACCGCAGGCTGAACACGCGGCCCCCACGCCTGCGCATAC CAATATCCGTGGCCGATCCTACTACCAGTGA Protein sequence : MPRRKQARRTTVRDIRTILRLTHEEGLSVREIAERLKIGKSSVSTYLLRSREAGLSWPLPIGADEDAKLERRLFGRAGRP PRDLSEPDWALVVRELKRKGVTLTLLWQEYRASHPDGYGFTWFCEQVAAFRQRTSVAFRNRHAAGAVMQTDYAGPTVPVI DPATGVIHPAQIFVAVLGASNLTFAHASFSQQLPDWIDGQVRALTFYGGVTKAIVCDNLKSGVAKALWFEPTLTATFAAM AEHYDTTILPTRSRKPRDKGRVEGAVLIVERWILARLRNRTFFSLAALNTAIAELLEDLNNRTMRHVGKSRRELFEEIER PALKPLPAIPFEYAEWKSAKVHPDYHVEVDKTFYSVPHRLIGCTLQVRLTHRVVEIFHDHQRVASHVRRSQRSGHVTVND HMPKAHQRYANTTPANLIGRATQIGPNAAILVERMMRDRPHPEQGYRSAMGILSLAPRYGSQRLEAACERALTINAITYS SVASILKSGLDRERPQAEHAAPTPAHTNIRGRSYYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 2e-100 | 45 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-100 | 45 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 1e-100 | 45 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 3e-103 | 41 |
