|
Name : kpsF (NGR_c02040) Accession : YP_002824757.1 Strain : Sinorhizobium fredii NGR234 Genome accession: NC_012587 Putative virulence/resistance : Virulence Product : sugar isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 229334 - 230344 bp Length : 1011 bp Strand : + Note : - DNA sequence : ATGGGCTTGCGACATGTGAAGGGTGAGGGGCATTCCCCCAGCGCCATTCTGGACTCTATCGGCCGGACGCTGACGACGGC GAGCAACGGCATCAAGGCACTGGCCGAGCACCTGGCGACGGACGAAAGTTTTGCGCAGAGCCTCGTCGAGGCGGTCGAAC TGGTCGGCGACGGGCATGGCCGCGTCGTCGTTTCCGGCGTCGGCAAGAGCGGGCATATCGGCCGGAAGATCGCCGCGACC CTGGCCTCCACCGGCACCTCCGCCTATTTCGTCCACCCGACCGAGGCCAGCCACGGCGACCTCGGCATGGTCACTTCCGA TGACGTTCTCATCCTGTTGTCCTGGTCGGGAGAGACGGCGGAGCTCGCCAACATGCTCACCTATGCCAAGCGCTTCAAGG TGCCGATCGTATCGATCTCGTCGAACCGCGACAGCATCCTGGCCCGCAATTCCGAGATCGCCCTCGTGCTTCCAAAGGTG CCCGAGGCCTGTCCGCACGGGTTGGCGCCGACGACTTCGGCCATGCTGCAGCTCGCCGTCGGCGATGCGCTGGCAATCGC GCTTCTGGAACGGCGCGGTTTTTCCGCGGAGGATTTCAAGACTTTCCACCCGGGCGGCAAGCTCGGCGCGCAGTTGCGCC TCGTGCACGAGCTGGCGCATGTGGCGGATCAGATGCCGCTACTCGTCGTCGGCCGGCCGATGAGCGAAGCCGTCATCGAA ATGTCGGCGAAAGGTTTCGGCGTCGTCGGCATCGTCGATGAAGGCGGCGTGCTGGTCGGGGTGATCACCGACGGCGATTT GCGCCGGCACATGGCCGGAGACCTGCTTGGCCAGCCGGTCGAAGAGGTGATGTCGTGTCACCCGAAGGTGATCCAGGCAG ACGTGCTGGCGAGCGCCGCCATGGAATTCATGCAGGAGCACAAGGTTACCGTGCTGTTCCTCGTCGACGAAACAGGGATG CCTGAGGGCATCCTCCATATTCACGATCTCTTGCGCGCCGGCGTTGCCTGA Protein sequence : MGLRHVKGEGHSPSAILDSIGRTLTTASNGIKALAEHLATDESFAQSLVEAVELVGDGHGRVVVSGVGKSGHIGRKIAAT LASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETAELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKV PEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHVADQMPLLVVGRPMSEAVIE MSAKGFGVVGIVDEGGVLVGVITDGDLRRHMAGDLLGQPVEEVMSCHPKVIQADVLASAAMEFMQEHKVTVLFLVDETGM PEGILHIHDLLRAGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-41 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 9e-42 | 42 |
