Gene Information

Name : phoB (NGR_c01490)
Accession : YP_002824704.1
Strain : Sinorhizobium fredii NGR234
Genome accession: NC_012587
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 169361 - 170044 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGTTGCCGAAGATAGCCGTTGTCGAGGACGAGGAAGCCCTGAGCGTGCTGCTGCGCTACAATCTCGAGGCCGAGGGCTT
CGAGGTCGATACGATCCTTCGCGGCGACGAGGCGGAAATCCGTCTGCAGGAACGCCTGCCCGACCTTCTGATCCTCGACT
GGATGCTGCCCGGAGTCTCCGGTATCGAGCTTTGCCGCCGGCTGCGGCAGAGGCCGGAGACCGAGCGGCTGCCGATCATC
ATGCTGACGGCGCGCGGCGAGGAAAGCGAACGGGTGCGGGGGCTCGCGACCGGTGCCGACGATTATGTCGTCAAGCCGTT
CTCGACGCCGGAACTGATGGCGCGGGTGAAGGCCATGCTCCGGCGCGCCAAGCCGGAGGTGCTGTCGACAGTGCTTCGCT
GCGGCGACATCGAGCTCGACCGCGAAACACACCGCGTGCATCGCCGCAGCCGCGAAGTGCGGCTCGGCCCGACGGAGTTC
CGGCTCCTCGAATTCCTGATGTCCTCGCCGGGCCGTGTGTTCTCCCGTTCGCAGCTGCTCGACGGCGTCTGGGGACACGA
CATCTATGTCGACGAACGTACCGTCGACGTCCATGTCGGCCGGCTGCGCAAGGCCCTGAATTTCTCCAATATGCCCGACG
TGATCCGGACGGTGCGCGGCGCCGGCTATTCGCTGGAAAGCTGA

Protein sequence : 
MLPKIAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQERLPDLLILDWMLPGVSGIELCRRLRQRPETERLPII
MLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRRAKPEVLSTVLRCGDIELDRETHRVHRRSREVRLGPTEF
RLLEFLMSSPGRVFSRSQLLDGVWGHDIYVDERTVDVHVGRLRKALNFSNMPDVIRTVRGAGYSLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 42
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 4e-27 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 4e-27 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 4e-27 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 5e-40 44
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB AE000516.2.gene3505. Protein 1e-33 44
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002952.2859905.p0 Protein 6e-42 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_007793.3914279.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_003923.1003749.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002745.1124361.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_009782.5559369.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002951.3237708.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_007622.3794472.p0 Protein 6e-42 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002758.1121668.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_009641.5332272.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_013450.8614421.p0 Protein 1e-41 43
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB CP001918.1.gene3444. Protein 1e-32 42
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 1e-34 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 1e-35 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 1e-35 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_012469.1.7685629. Protein 2e-36 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB BAC0197 Protein 2e-28 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002516.2.879194.p Protein 5e-27 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB BAC0039 Protein 5e-32 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB CP000034.1.gene2186. Protein 5e-32 41
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB NC_002695.1.916589.p Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB VFG1390 Protein 1e-36 45
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 1e-34 42
phoB YP_002824704.1 phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 1e-34 42