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Name : rkpS (NGR_b09510) Accession : YP_002823160.1 Strain : Genome accession: NC_012586 Putative virulence/resistance : Virulence Product : RkpS, polysaccharide export protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1134 EC number : - Position : 943651 - 944310 bp Length : 660 bp Strand : - Note : - DNA sequence : ATGATCCGGTTCGAGCAGGCGACGAAATATGCCCGCACCAAGGGCATCAAGAAGCCGATCATCGAGGATGCCTCCTTGAC CCTTAACCGCGGCAAGAGCGTCGGGCTGCTCGGCCGCAACGGCGCCGGCAAGTCTACGCTGCTTCGACTGATTGCCGGCG CGCTCAAGCTCGACAGCGGCCGGATCATCCGCCTCGGCAAGATCTCCTGGCCGCTCGGCTTCGCCGGCAGCTTTCAGGGT TCGATGACTGGCGAACAGAATGTGCGCTTCGTCGCCCGCATCTACGGCGTCGATACGGAGGAACTCATCGCCTATGTTGA GGATTTCGCCGAACTCGGGCCCTTCTTCAAGGCACCCGTCGGCACCTATTCCTCCGGCATGAAGGCACGGCTTGCCTTCG GCTTGAGCATGGGCGTCAACTTCGACTATTATCTCGTCGACGAAATCACCGCCGTTGGTGACTCAAATTTTAAGAAGAAG TGCCAAGCTGTTTTCCAGACCAAGCTCCAGGACTCCGACGTGATCATGGTCTCGCACAGCACCGGTACGATCCGCGACTA CTGCGACTGCGGCGTCGTGCTGGAAAAAGGCAAGCTGACATATTATGAAGACGTCGAGGACGCGATCCGCGCGCACGACA AGAACATGAGGGAAAATTGA Protein sequence : MIRFEQATKYARTKGIKKPIIEDASLTLNRGKSVGLLGRNGAGKSTLLRLIAGALKLDSGRIIRLGKISWPLGFAGSFQG SMTGEQNVRFVARIYGVDTEELIAYVEDFAELGPFFKAPVGTYSSGMKARLAFGLSMGVNFDYYLVDEITAVGDSNFKKK CQAVFQTKLQDSDVIMVSHSTGTIRDYCDCGVVLEKGKLTYYEDVEDAIRAHDKNMREN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsT | YP_854396.1 | polysialic acid transport ATP-binding protein KpsT | Not tested | PAI I APEC-O1 | Protein | 2e-50 | 50 |
| kpsT | CAE85223.1 | KpsT protein | Virulence | PAI V 536 | Protein | 1e-46 | 50 |
| ctrD | NP_273138.1 | capsule polysaccharide export ATP-binding protein CtrD | Not tested | IHT-A | Protein | 9e-47 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rkpS | YP_002823160.1 | RkpS, polysaccharide export protein | VFG1449 | Protein | 9e-51 | 50 |
| rkpS | YP_002823160.1 | RkpS, polysaccharide export protein | VFG0258 | Protein | 3e-47 | 49 |
| rkpS | YP_002823160.1 | RkpS, polysaccharide export protein | VFG0696 | Protein | 6e-47 | 48 |
| rkpS | YP_002823160.1 | RkpS, polysaccharide export protein | VFG2563 | Protein | 6e-46 | 44 |
