Gene Information

Name : NGR_b07970 (NGR_b07970)
Accession : YP_002823008.1
Strain :
Genome accession: NC_012586
Putative virulence/resistance : Unknown
Product : transposase number 1 for insertion sequence NGRIS-5e
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 798309 - 799823 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
GTGCCGGGTCGCCATGTAACCGATCATCAGATGAGATTATTCATGAAGTACCGACAAACGCATTCTGTTGAGGTCGCCGC
CGCGAAGGCGTCGATCAGCCGGGCGACGGCGTTCCGCATGGAGAAAGAGCAGCGCCTTCCGTCGCAGAACAAGCCGCCCC
GCGGTCGGCGTCGACCCGATCCGCTTGAGCATATCTTTGATGCGGAGGTCGTTCCGCTCCTCAAGGCCGCTCCCGGCATT
CGTGCGGTCGCCGTTTACGACGAGATGCTGCGGCGTCATCCGGAACTGCCCGAAGGCATTCGCCGCACACTTGAGCGGCG
CATCCGGTCATGGCGGGCGGTTCACGGTGAAGCACAGGAGGTGATCTTCCGCCAGACGCACGAGCCCGGCCGACTAGGGC
TGTCGGATTTTACCGACATGGGCAGCCTCAGCGTGACGATCGCCGGCCAACCGCTCGACCATCTGCTCTATCACTTCCGG
CTGGTTTGGTCGGGTTTTGAGCACGCCCATGTCATCCTTGGCGGCGAAAGCTTCGTCGCCTTGGCGGAGGGCCTGCAGAA
CGCCCTGTGGTCGGTCGGCGGTTCGCCGCTCTATCACCGCAGCGACAGCCTGTCGGCTGCCTTCCGCAACCTCGATGCCG
ATGCCAAGGTCGATCTGACAAACCGCTATGAGGAGCTGTGCGCTCACTACCGGATGACGCCGACGCGCAACAACAAGGGC
GTCGCCCACGAGAACGGCTCAATCGAAAGCTCCCACGGCCATCTCAAGAACGCAGTCCGCGATGCACTCCTGATGCGCGG
CACCAGAGACTTCGACGATCTGCGCTCCTACCGCGCCTTCATCGACGAGATCGTCAGCCGCCGCAATGCCGCGCATGGCA
AGCGCATTGATGCCGAGCGCCCGCATCTGCAGGTGCTTCCCGAGCGCCGCACCACCGACTTCGAGGAGGTAGTCGTCACC
GTGTCGCGCACCGGCGGCTTCGCCTTGCGCAAAGTCTTCTACACCGTCCCCTCCCGTTTGATCGGCCATCGGCTGCGTGT
GCGTTTGTTTGACGATCGTCTCGACGTCTTCATCGGCGGCACGCATCTGCTGACGTTGCCACGAGGTCGCGCCCACGCGA
GCGGCAAGCATGACCAGGTCGTCAACTATCACCACGTCATCCACTCTCTGCGCAAAAAGCCCATGGCGCTTCTCAACCTG
GTCTATCGCGACAAGCTCTTCCCCCGGCCGGAATATCGCAGGGCTTTCGACGCTCTCATCGAGCAACTGCCTGACCGGCA
GGCTTGCAAGATCACCGTCGAATTGCTGGCCCTGGCTCATGATCGCGGTTGCGAGCGTGAACTGGCCGAGGAGCTTGCCA
GAACGCTCGACGCCCGCAAACTGCCCGACCTGATGGCCTTGAGAGCCATCTTCGGTCCGGACCCGGATCAGTTGCCGACC
GTGCATGTGCAGCTCGCATCGCTCAATAGCTATGAAGCCCTGATGGGGTCTGCTTATGCGGGAGAGGCCGCATGA

Protein sequence :
MPGRHVTDHQMRLFMKYRQTHSVEVAAAKASISRATAFRMEKEQRLPSQNKPPRGRRRPDPLEHIFDAEVVPLLKAAPGI
RAVAVYDEMLRRHPELPEGIRRTLERRIRSWRAVHGEAQEVIFRQTHEPGRLGLSDFTDMGSLSVTIAGQPLDHLLYHFR
LVWSGFEHAHVILGGESFVALAEGLQNALWSVGGSPLYHRSDSLSAAFRNLDADAKVDLTNRYEELCAHYRMTPTRNNKG
VAHENGSIESSHGHLKNAVRDALLMRGTRDFDDLRSYRAFIDEIVSRRNAAHGKRIDAERPHLQVLPERRTTDFEEVVVT
VSRTGGFALRKVFYTVPSRLIGHRLRVRLFDDRLDVFIGGTHLLTLPRGRAHASGKHDQVVNYHHVIHSLRKKPMALLNL
VYRDKLFPRPEYRRAFDALIEQLPDRQACKITVELLALAHDRGCERELAEELARTLDARKLPDLMALRAIFGPDPDQLPT
VHVQLASLNSYEALMGSAYAGEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 4e-77 42
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 4e-77 42
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 3e-77 42
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-77 42
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-77 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NGR_b07970 YP_002823008.1 transposase number 1 for insertion sequence NGRIS-5e VFG1728 Protein 3e-77 42