Gene Information

Name : VC395_A0726 (VC395_A0726)
Accession : YP_002821796.1
Strain :
Genome accession: NC_012583
Putative virulence/resistance : Unknown
Product : putative peptide ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 676840 - 678432 bp
Length : 1593 bp
Strand : +
Note : -

DNA sequence :
ATGAACGATTGGGTATTGAAGATAGATAACCTGTCGGTGGGCTTTGGTATCGCAGGGCAGGCACGCCCTGTGACGGAAGG
GGTAAGCTTAACCATTGCGCGTGGTGAAACGTTGGCTTTGGTGGGAGAAAGTGGCTCGGGAAAATCCGTGACAGCCAACG
CGATTTTGCGTTTGTTGCCCAAAGGATCGGCGCACTATTTAAGTGGCAGCATTCATTTTGGCGATGTAGATACCCTGCGC
TGCTCAGAGCGCGCGCTGCGCGGCATCCGCGGGGGACGCATAGGGATGATTTTTCAAGAGCCGATGGTCTCGCTTAATCC
TCTGCACAAAATTGGAAAACAGTTGGTGGAAACCTTAGCGATCCATCGAGGATTACGTGCAACGGCAGCAGAGCAAAAAG
CGATTGAATGGCTTGGCAAGGTGGGGATTCGTCATCCTGAAATTAAGATCAATGCCTATCCGCATGAACTCTCAGGCGGT
GAGCGGCAACGTGTGATGATTGCCATGGCGCTAATCAATGAACCCGAGCTACTGATTGCCGATGAACCTACCACAGCATT
AGATGTTTCGGTACAAGCACAGATTTTGGATTTACTTAAATCTCTGCAACAAGAATTGGGCATGGCGATGTTGTTCATTA
CCCATGATTTGAGCATAGTGCGCCGAATTGCTGACCGAGTGGCAGTGATGCAAAGTGGCCAATTGGTCGAAACTAACGCG
TGCCACACTTTGTTTGCTGCGCCTGCACATCCCTATACCCAGCAGTTGATCAATGCCGATCCGCGTGGTGTGCCCGTCCC
TACAGCGATGGATGCTCCGACGCTGCTGCAAGCGGAAAAGTTACGGGTGTGGTTTCCAATCAAAGGCGGTTATTTTCGCC
GCACTCAAGCCTATATAAAAGCGGTTACAGATATGAGTTTCACCTTGGCCAAAGGGCAATCGTTGGGTTTGGTGGGGGAA
AGTGGTTCAGGGAAATCGACCACGGGCATGGCGATTCTCAAGCTTCTCGCCTCACAAGGGGCTATCCGTTTTGCAGGGCA
AGATCTGCAAGCTCTCAAACGCCGTGAAATGCTGCCGTATCGCAGTAAAATGCAGGTGGTGTTTCAAGACCCATATTCTG
CGCTTAATCCTCGAATGTCGGTGGCGCAAGTGATAGGCGAGGGTTTACGCGTGCATAGCCAGCTTAATGATGACGAGATT
GATCACGCGATTTGCGCGGTGATGCAGGAAGTCGGCCTAGATGTAGACACTCGGCATCGCTATCCCAATGAATTTTCTGG
TGGTCAACGGCAGCGTATCGCGATTGCGCGTGCGTTGGTGCTCAAGCCTGAGTTCATATTGCTTGATGAGCCAACCTCAT
CGCTAGACCGAACTGTACAAGCGCAAGTACTGGATTTGCTGAAAGATTTGCAGCAGAAATACCAATTAACCTATCTGTTT
ATTAGCCATGATCTCGCGGTGATCCGCGCTTTATGTCACCACACCATAGTGATGAAAGCGGGGGAGATTGTCGAACATGG
CGAAACTCAAAGCCTATTTGAGAATCCAAGTCACCCGTATACGCAGCAGCTAGTGCGTCTTTCTCTGTTGTAA

Protein sequence :
MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLR
CSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGG
ERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA
CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGE
SGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEI
DHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLF
ISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-69 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-69 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-85 42