Gene Information

Name : VC395_0863 (VC395_0863)
Accession : YP_002819113.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Unknown
Product : integrase, phage family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 935016 - 936284 bp
Length : 1269 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAAAAACACAGTAAAGCTGACAGATAAAGAGATCAAAGCCTCCAAACCTAGAGAGAAAGAATATAATCTTTTCGA
TGGTGATGGCTTGCGACTTAGAATCAAACCTAACGGTTCAAAGCAGTGGATCTTCAACTACTATCGCCCCACAAACGGTA
AACGAGCTAACTTAAGCTTTGGAATGTACCCAGACATCTCCCTTTTACAAGCAAGAAAAAGCTTACTTTCTGCCAAAGAG
CTGATCGCACAAGGCATCGATCCACAAGACGATCGAAAACGCCAACAACAAGTACATAAAGAGATCCATGAGCACACCTT
TGAGAACGTCACAAAGGATTGGTTTGCCATCAAACAGAATGATGTGACACCGGATTACGCCCTTGATATCTGGCGTTCAT
TAGAGCTACATATCTTCCCGCACATTTCCGACAAACCGGTAAAAGCGATCACCGCTCCGGAGATCATAGAACTACTCAAA
CCGATTGAAGCCAAAGGTAGCCTAGAAACCGTCAAACGTTTAACACAGCGACTCAATGAAGTGATGAACTTCGCCACTAA
CTGCGGTCTTATCCAGGCCAATCCATTAACTGGCATCAAAGCCGCCTTCAAGAAACCAAAAAAAGAAAACATGGCAGCAC
TGACACCAGCAGAACTGCCCGAACTCATGAGCGCAATCGCTAATGCCAGTATCAAACGCACTACCCGTTGTTTACTTGAG
TGGCAACTACACACCATGACGCGCCCAGCGGAAGCATCTGGTGCACGTTGGGATGAAATTAATTGGGAAGAAAAGGTTTG
GACCATTCCTGCTGAAAGAATGAAAAAAAGAAGAGAACACCGCATCCCGCTCACAGAGCAGATGCTGGCGCTATTGGAAG
TAATGAAACCGATAAGTGGCCATCGTGATTTTATTTTTCCGTCGGATAGAGCCCCGAAAAAGCCCTGCAACAGCCAAACG
GCAAATATGGCATTGAAACGTATGGGGTTTGCTGGAAGGCTGGTTAGTCACGGTTTGCGCTCTCTAGCGAGTACCACACT
CAACGAACAAGGCTTTGATCCAGACTTGGTTGAGTCGGCATTGGCTCACGTGGACGATAACCAAGTACGCAGTGCCTATA
ACCGCACTGACTACTTAGAACGCAGAAAACCAATGATGTGCTGGTGGAGCGAGCATATAGAAGAGGCAGCCAGAGGTAGC
CTATCTGTGACTGGTACAAAGCAATTGAAAAATAAACTTCCACCGCCCCCCACATGGAAGCAGATGTGA

Protein sequence : 
MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDISLLQARKSLLSAKE
LIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLK
PIEAKGSLETVKRLTQRLNEVMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE
WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISGHRDFIFPSDRAPKKPCNSQT
ANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESALAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGS
LSVTGTKQLKNKLPPPPTWKQM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82714.1 integrase Not tested VPI Protein 0.0 100
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 0.0 100
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 0.0 100
int AAK20773.1 integrase Not tested VPI Protein 0.0 100
int AAK20803.1 integrase Not tested VPI Protein 0.0 100
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-111 54
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-105 54
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-105 54
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-105 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC395_0863 YP_002819113.1 integrase, phage family VFG1092 Protein 7e-106 54