Gene Information

Name : VC395_0861 (VC395_0861)
Accession : YP_002819112.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : putative lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 928962 - 933101 bp
Length : 4140 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAATATGGCGACAATACATGGAGATAAAATATCTCTAGTTTTCCGAAGTACTCTTGATGCCTTGACATTCGAAAA
TTATTTACGGCACAATTTAGATCTTCCCAAAGACCAATTTTTAGAAGCAATTACAGAAAAAATCGCCAATGATAATCAGG
TCGATAAGCAACCTTCAACTCATGTGCCTAATATCTCTCCATCATTCACGCCTGGGACTTCATCTAATTTGAATAGTCCA
TTCGTTTCTGCTAATGCTGAAGAGTCTTTGAGCTATATACCGACAGATGTTATTCCTTCGCTTGGTCGCTTACTTGATAG
TCAAGGTCGAGTTATTAATGGTGTTTCATACTTCAGTAATAATACTCGTGGTATTACTGGTGTAGATAAAACAGGGGCTA
TTTTAAATGATGGTTCATTTGAATTTTCGTGGGGAGATATTATTAGCTTTTCAATCGATACATTTGAATTAGGTAGTACT
CGAGCTAATAAAACTGATTTTTATATCAGTGAATTAGGTAAGGACAATGAGGGTAAGAATGCTGAAGCTTTGATTCATCG
TTATGCAAGTATTGATGATTCTAAGCTTATCATTCCAGATAAAGTTACGCAGATTTTTTCCCTATACCCTAATGTCATTA
ATGAAGTGATTTCATTATCATTACCTAATGGCGATATCGAACTTGATATTGGAGATGGTAAAACTCAGATTGTACCTGGT
GAATTCTTTAAGCAGTTTGATTCTGGATTAGCAGCACTTATCGATCAATCTATTTCACCTATATCGAGGTTCAAATTTGA
AGACAGTTTGCCTAAGAAAAAGTCAGCAATTGATTCTGAATCTTCACAAATCCAAGATATTATTAATAAACTCTGGGGTG
CAACCGATACCGTACAAGCTAATGGATGGAAAAAAGTCGATCGTTTTCATATTTTTCATGACAGTACAAACTTCTACGGT
AGTACAGGAAGTGCCCGAGCACAAGCAGCGGTGAATATTGCTAATAGTGCATTTCCAGTCTTAATGGCTCGTAATGACAA
TAATTACTGGATTGATTTTGGTAAACCTAAAGCATGGGATTCGAATAGTCTGGCATTTATTACTGAAGCACCTTCTACAG
TTGTGCCTGATAAAGTATCTGAAGATACATCAACCTTTAATTTACCTTTTATTAGTTTGGGCGAAATTGGTAAAGGCAAG
CTGATGGTACTAGGAAATGCGCGATATAACAGTGTCTTAGTCTGTCCTAATGGATTTAGTTGGGGCGGAACTGTTAAAAA
TGGTACTTGTAGCTTAAGTAGTGATCGTGATGATATGGCTAATTTTTTTAGTAATGTCATCCGCTATCTTACGGGAAGTA
CTTCCAATGATGTTATTGTTGGAACTAATATTCCAGAAGTTTACTTTAAATCATCTGGCCAAACTATGGGGTCAAAAGCC
AATTTTGAACTCGATTCAAGATTCTCTAAGCAAACTCAACAGTTGACTAGTTTCCATGATTTAGATGTTAATACTATACC
TCTTATTATTATCAATGCATACGACTATAAAGGAAAAAACATAAATAGTCCGTATGATATTCCATTAAGTGCTGATGTAG
GCAGTCCGAAATTGTCTCGTTCTGATGTCACTGATTTAATTGATTATATAAACAACGGTGGTAGTGTATTAATGATGGAG
ACTATCATTAATACAAATAACAGTGAGATTTCTCGTTTATTGGACAGTGCTGGTATTGCTTTTGGCATTGGAAACAGTGT
AGTTGCTGACGGTAATGGCCCGAGTGGAGGCCACCCAGATCGCCCACGTAGTCAGCGAGAGCACGGTATTTGGGTTATTG
AGCGATATGCAGCTGTTGAAGACGAGTCTTCTGGTCAACAGACGCTACCTTATGTGATTAATAGTGATGGTTCAATTGAG
TGGAAGTATATTGTAGAGAATAGGCCCGATGATAAACCTAAACTTGAAGTCGCGAGTTGGGTTGAATCTGAAGCTGGAGA
TAAATTAATTACTCACTATGCATTTATTGATGAGTCTCAGCACTGGAAAAAAGATATTTCAGGTAAAATAATCTATAACG
TGGCAGGGAAGCCGGAAGTAGATAATGCATCATTATCTTTGGCTAAAAATAAAGTACTTGATGCTTTTAAAAACAGTAGT
GGCCAGAGAGCCTACTCTGAATGTAAAAATTCTGAGTTTCATTATGAGATTAATTGCTTAGAATATCGTCCAGGTAATTC
AATTCCTATTACTGGTGGTTTGTATGTACCCCGATATACTGATATTAAGTTAGGAGAGTCTGAAGCCAATGCTATGGTAA
AGGCGGCTAATCTTGGTACAAATATTCATGCTTTATATCAGCATGAACGTTATTTCCGAACTAAAGGAAAGTCGGGAGCC
CGTTTAAATAGTGTTGATTTGAATCGAATTTATCAAAATATGTCAGTATGGCTTTGGAACGACCTTGATTATCGTTATGA
TGATAAGCAATCCGATGAGCTTGGATTTAAAGTTTTTACACAGTATTTGAATTGTTACACTAGTAACAACGCTGGTGGTA
ATACAACTTGCCCAGAAGAATTGAAAGATGAACTTACTCAGCTAGGTATGATTTATGACGAAAAATCAGGAAGCTATGCA
GGTCAAATGGATCCAAGTTACCCACTTAATTATATGGAAAAGCCACTGACCCGTTTAATGTTAGGGCGCTCATTCTGGGA
TCTTGATATCAAAGTTGATGTCAGAAAGTACCCCGGTGAAGTCACAACAAGATCAGGTGGAGGGGATATTACTCTTGACA
TGCGTAATAATACGGCAGCTTGGTTTGCGGGTAATAGGCAGCCGACAGGGCAGTGGGCCGAAGCTCATCAGCCTTTTAGT
GTTTCAGTCTCAGGAGAAACATCGCCTGTCACCATCACCATTGCATTGGCTGATGATTTAACTGGCCGAGAGAAGCATGA
GCTTGGTTTAAAGCGTCCTCCTCGCATGAGCAAATCATTTGTTATTGGCGGCGATAGTCCGAAAATGCAGACTTTTACCG
TACCCTATGGTGGGTTAATATATGCACAAGGGGGAAATTCTCAACAGGTCAAACTAACATTTTCAGGAACTATAGATGCA
CCGCTCTATATTGACGGTAAGTGGAGAAACCCTCTTTTATCTGGCGCACCAATTGGTGAAGTAGTGTCAGACACCTTCAT
ATTTACTGCACCTAAAGCAAATTTAAATGCCGATGGTTATTTGGGGGGGATCGAACAGTTTGCAAAAGATCTTGATCAAT
TCTCAGCGGATTTAAACGATTTTTATGCCCGTGATGAAGGTGCGGACGGTGACAAAAATCGCAAAGCTACTGATAAGTCA
ATGCCTAATAATCGTCACCATTTCGTCAATGATGTCGCAATAAGTGTTGGTGCTGCACACTCTGGCTATCCGGTCATGAA
TGATAGTTTTATTACCAGTAGCCGTAGTTTGAACACTATGCCGCTGAACAGCTGGCTGCTTTGGCATGAGGTCGGGCATA
ATTCAGCAGAAGCTCCTTTTAATGTTGATGGGGCCACAGAAGTTGTAAACAACTTACTTGCCTTATATATGCAAGATCGT
CATCAAGGAAAAATGTCTCGTGTAGAACAGGATATCCGTTATGCTTTCGATTTTGTTAATGCTGAGCATGGGCATGCTTG
GGGAGCCGGTGGTGCTGGTGAACGTTTAGTTATGTTTGCGCAACTTAAAGAGTGGGCAGAAACTGAGTTTGATATAAATG
ACTGGTATAATGATAAGCTACCTGGTTTTTATATTGAAGAAAGCGGAATAAAAGGTTGGAACTTGTTTAAACTGATGCAT
CGGTTAATGAGAAATGAGAACGATGACCAAATCAATATGAAGGGAGAAAATCAATGTAAGATATCTGGTATTGGTAAAAG
TGATCTATTAATGCTTTGTGCATCATATGCCGCTCAGACGGATTTGTCAGAATTTTTTAAAGCATGGAATCCGGGAAGTA
AGGCATTTCTCTATCCAGATGATCCTCAGCCATATTACGAAGGAGGAATAACTCCTTCTGGGATTCAGAGAGTCAAATCT
TTAAAATTGAATCTTCCCCAAAAAAATCCCCTTTCTATAAACAGTGTTACACAACATTAG

Protein sequence :
MKNMATIHGDKISLVFRSTLDALTFENYLRHNLDLPKDQFLEAITEKIANDNQVDKQPSTHVPNISPSFTPGTSSNLNSP
FVSANAEESLSYIPTDVIPSLGRLLDSQGRVINGVSYFSNNTRGITGVDKTGAILNDGSFEFSWGDIISFSIDTFELGST
RANKTDFYISELGKDNEGKNAEALIHRYASIDDSKLIIPDKVTQIFSLYPNVINEVISLSLPNGDIELDIGDGKTQIVPG
EFFKQFDSGLAALIDQSISPISRFKFEDSLPKKKSAIDSESSQIQDIINKLWGATDTVQANGWKKVDRFHIFHDSTNFYG
STGSARAQAAVNIANSAFPVLMARNDNNYWIDFGKPKAWDSNSLAFITEAPSTVVPDKVSEDTSTFNLPFISLGEIGKGK
LMVLGNARYNSVLVCPNGFSWGGTVKNGTCSLSSDRDDMANFFSNVIRYLTGSTSNDVIVGTNIPEVYFKSSGQTMGSKA
NFELDSRFSKQTQQLTSFHDLDVNTIPLIIINAYDYKGKNINSPYDIPLSADVGSPKLSRSDVTDLIDYINNGGSVLMME
TIINTNNSEISRLLDSAGIAFGIGNSVVADGNGPSGGHPDRPRSQREHGIWVIERYAAVEDESSGQQTLPYVINSDGSIE
WKYIVENRPDDKPKLEVASWVESEAGDKLITHYAFIDESQHWKKDISGKIIYNVAGKPEVDNASLSLAKNKVLDAFKNSS
GQRAYSECKNSEFHYEINCLEYRPGNSIPITGGLYVPRYTDIKLGESEANAMVKAANLGTNIHALYQHERYFRTKGKSGA
RLNSVDLNRIYQNMSVWLWNDLDYRYDDKQSDELGFKVFTQYLNCYTSNNAGGNTTCPEELKDELTQLGMIYDEKSGSYA
GQMDPSYPLNYMEKPLTRLMLGRSFWDLDIKVDVRKYPGEVTTRSGGGDITLDMRNNTAAWFAGNRQPTGQWAEAHQPFS
VSVSGETSPVTITIALADDLTGREKHELGLKRPPRMSKSFVIGGDSPKMQTFTVPYGGLIYAQGGNSQQVKLTFSGTIDA
PLYIDGKWRNPLLSGAPIGEVVSDTFIFTAPKANLNADGYLGGIEQFAKDLDQFSADLNDFYARDEGADGDKNRKATDKS
MPNNRHHFVNDVAISVGAAHSGYPVMNDSFITSSRSLNTMPLNSWLLWHEVGHNSAEAPFNVDGATEVVNNLLALYMQDR
HQGKMSRVEQDIRYAFDFVNAEHGHAWGAGGAGERLVMFAQLKEWAETEFDINDWYNDKLPGFYIEESGIKGWNLFKLMH
RLMRNENDDQINMKGENQCKISGIGKSDLLMLCASYAAQTDLSEFFKAWNPGSKAFLYPDDPQPYYEGGITPSGIQRVKS
LKLNLPQKNPLSINSVTQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0370 YP_001216326.1 lipoprotein Not tested VPI-1 Protein 0.0 100
VC0845 NP_230493.1 hypothetical protein Not tested VPI-1 Protein 0.0 100
acfD AAK20802.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD ACK75646.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD ACK75664.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD ACK75670.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD ACK75649.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 99
acfD ACK75655.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 99
acfD ACK75652.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 98
acfD ACK75661.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 96
acfD ACK75667.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 96
acfD ACK75658.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 96
unnamed CAE85238.1 hypothetical protein Not tested PAI V 536 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC395_0861 YP_002819112.1 putative lipoprotein VFG0106 Protein 0.0 100