Gene Information

Name : acfB (VC395_0856)
Accession : YP_002819107.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : accessory colonization factor AcfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 923653 - 925533 bp
Length : 1881 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTTTTCTATCAAGTTACTAATGATTTTTACATCAATTATAATTACTATTTCATCTATCCTTACTTACTTTCAGAT
GCATGGAACCAATGAATATCTTGATCGTACGATAAAAGATACTATTTCTGAAACGCTAGACTCTTTGGAAGATAAAATAA
ATCTTTCTATTGAGTCCAAGGTCGATGTGTCAAAATCTGTTATCGACATTTATGAAAATTTACTGGAGGGGGAATCCCCT
CTCAGTAAATTTAAGGATGTTGATGTCAATCATCTTTCAAATGTTTTTCAATTGTTCGGATATGCTGATGAAAGAACAGG
AGAGATCATTACTAATGACCCAAACTTTAAAGTGCCTACAGGATTCGATCCAAGGACTCGATCGTGGTATTTAAATGCAA
AAAAATTGAATACCTTTAGTTTGTCTGAGCCGTATGTCGATCTCATTACAGAGAAGTTAATGGTGACAACAAGTGCACCA
ATATATAATAAAAACGATTTAACAGGAGTTATATTTTTTGATATACCACTAGATGACGTTCAGGAATTAATTAAAAGCTA
CAATCCATTTGATGCCGGCACGATTTTTATCGTTGATAACAGTGGGAAAATAATTTTCGGTAATAAAAATGATATATCGG
GTAAAAATTTATTTGGAGACTTTGATAGCTTCCCTCTATCGGTAAGTGAGTCAAAAACGAAAGATAAAAATGGGGTAAAT
TACGATGTATTCATCAAAATGTCAGACTTTGGCGATTGGAATCTTGTTTCTATTATCGACCATGATAAAGCACGCTCTGA
TATTATCACGTTGAGAAACAATAGTATATTTACTGCCGTCATTTTAGCAAGTGTTTTCTTTGCTATCTTGTTGTTTACTA
TGCGGTTAATGCTGAAGCCATTGCATCAATTAACCGATGCAATGGTAAATATTTCATCGGGCAGTGCTGATCTTACGGTT
CGTATCCCGAATAGTACGGATCAAGAGTTTTCAAAAATAATAAATTCCTTTAACATTTTTGTTGGTAATCTGCAATCTAT
TGTGTCGGAGGTTAAAATGAACTCAGAAAAAATAAATTGCATAACTACTGAAACACAAGAGCTAGTCGAAGTTTGCAATA
ATAGCGTAGCTGATCAGTATCGTGAACTTGATATGCTAGCTAGCTCAATGAATGAGATGGTGGCAACATCTAATCAGATT
GCACAAATTACATCCGAAGCATCAGAGATCACATCTAAGATTAACGGTCAAGTGAATGAAGGAGTCGGTGCTGTTTCTTC
TGTTACCGAAAGTGTAGGTAATTTAGTTGAGAAGTTGGATAAGACGAAATCTGTTATCCAAGATCTTAATCGCCAAACTC
AAAATATAGATGTTATTTTGAAGGCTATTAATGATATTGCTGACCAAACAAACCTTCTTGCTCTTAATGCTGCAATTGAG
GCTGCACGAGCTGGGGAAAATGGACGAGGTTTTGCTGTGGTTGCTGATGAGGTACGCAGCCTAGCAATAAAGACACAAGA
GTCTACTAAAAATATAGGAAGTATTATCCATATATTACAAGAAAACTCTTTGCTATCCGTTCATGTTATGGATGAAAGTT
TTAATATTGCCTCTGAAACTATGACTATATCAGCTGATTCAAAACAATGTTTAGACAATATTAGTCAATCAGTAATACAA
ATTGTTGATATCACAAATCAAGTAGCTACAGCTGCTTACGAACAAAGTCACGTATCAGAGGAAATAAACAGCAACTCTAT
TTCTATAAAAGATAAAGCAGATACCTTATCAAGTTTGGGTAATAAGATTTCTCAACAGGCTTATTCTCAAAAAGCACTGA
TTGGTCATCAAGATGATTTAATCAGTAAGTTTATCATTTAA

Protein sequence :
MKFSIKLLMIFTSIIITISSILTYFQMHGTNEYLDRTIKDTISETLDSLEDKINLSIESKVDVSKSVIDIYENLLEGESP
LSKFKDVDVNHLSNVFQLFGYADERTGEIITNDPNFKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAP
IYNKNDLTGVIFFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKDKNGVN
YDVFIKMSDFGDWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTV
RIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQI
AQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIE
AARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQ
IVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKFII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfB AAK20767.1 accessory colonization factor AcfB Virulence VPI Protein 0.0 100
acfB YP_001216321.1 accessory colonization factor AcfB Virulence VPI-1 Protein 0.0 100
VC0840 NP_230488.1 accessory colonization factor AcfB Virulence VPI-1 Protein 0.0 99
acfB AAA82705.1 AcfB Virulence VPI Protein 0.0 99
acfB AAK20797.1 accessory colonization factor AcfB Virulence VPI Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
acfB YP_002819107.1 accessory colonization factor AcfB VFG0104 Protein 0.0 99