|
Name : tcpB (VC395_0845) Accession : YP_002819096.1 Strain : Genome accession: NC_012582 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein B Function : - COG functional category : - COG ID : - EC number : - Position : 913362 - 914654 bp Length : 1293 bp Strand : + Note : - DNA sequence : ATGAGAAAATACCAACAAGGTGTCGGATTATTGGAGGCGATTCTGGCTTCTGCCGTATTAGGGATGGCATTGGTCGCTGC TGGGAGCTATTACAAGCGGGAAGCTGAACTCATGATTAAATCCAGTAACGCATTTGATGTTATTGAGTTGTCATCTCAAA TCCAGCGTTACGCCTCTTTAAGTAAAATTAATAATCGTACTAACCCAATACTCAAAGATAATAAGGCAAAAGAATTTAAA GATGCGGATTTGAAATGGTTAAAGCTTGAAAACTGCCCCACAGCAGGTGATGTACCGACAACGGGTAATAATAATGATTT ACAAGATCAGTTTATTGCTTGTGATGCAGATTATAGGAAAGGTGATCTAAGCTATTTTGGGAGTCAGTTTGAATTCTCAA CCTATGTACATCCTTCCAACCCGGAAATTCAACGACAAATAAAACAAGTCGTCAGCTATTTTCAATATCGAGGCATGGAA AGAGCGTTTATTGGCGATGCTGCGGGTTATGTTATCAGTGAGGCCAAGAAAAAAGGATTTAGCGCACAAGACTATCGAAT CGTTCTAATAGAACCTGATCGTGTCGGGTATTTTGAGTCAAATGCTATTAGCTATGAAGAATTTATAGAAAATCCATCCG CTCGCGAAAATTTTCTTTTAAAAGCGACGAAAGATAGAACTCTGGCGTTGGCGGTCAGTCTTGCTCAAACCGGAGAAATA GCAATGCAACGTGATGGTTCCGTTGCATTTTTAGAAGATAGTGAGTTGTGTTGGGATACGGCGGCAGGTAGTGCAAAGTC TTGTCTCTCGGTTCGGTACGATACCGTTGGAAATAAAACAGAACTGGATTTAAAACAGATAGATGTGGTCAGTGCGAAAG GCCTATCATTTGAAAGTGATGGTAAAACAAAAACACCAGTGGTTTCGACTTATGAGACTTTTCAAGATGGTGGGCGGGCT AAAACCATTAACGCTATTGAATGCCCAACAGGTTTAAATAATCGTTTTGCCGCGGTGGTGAGTTCATTTTCAACTGCTGG ACAGAATGCAAACTTTAGTTCAGAGAGTGCTAAGGATTCTCAAGGCACAACCCAAAAGGATGGTAGCAAAGGACCGCATG CGCTTCTATCCGGTATATCACTGAACTGGACATTAACGAATAAGGTATGGGATGTAACCGCCTCGATTGGTATCGAGTCC GGTATATTGCCTACTTCAGGTATCGATTCTGGATCGTTATTACGAAACCCTAAATCATTGTCTTTTATAGCGTTTCAATG GTGTGAAAATTAA Protein sequence : MRKYQQGVGLLEAILASAVLGMALVAAGSYYKREAELMIKSSNAFDVIELSSQIQRYASLSKINNRTNPILKDNKAKEFK DADLKWLKLENCPTAGDVPTTGNNNDLQDQFIACDADYRKGDLSYFGSQFEFSTYVHPSNPEIQRQIKQVVSYFQYRGME RAFIGDAAGYVISEAKKKGFSAQDYRIVLIEPDRVGYFESNAISYEEFIENPSARENFLLKATKDRTLALAVSLAQTGEI AMQRDGSVAFLEDSELCWDTAAGSAKSCLSVRYDTVGNKTELDLKQIDVVSAKGLSFESDGKTKTPVVSTYETFQDGGRA KTINAIECPTGLNNRFAAVVSSFSTAGQNANFSSESAKDSQGTTQKDGSKGPHALLSGISLNWTLTNKVWDVTASIGIES GILPTSGIDSGSLLRNPKSLSFIAFQWCEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpB | AAK20756.1 | toxin-coregulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 100 |
| tcpB | YP_001216310.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI-1 | Protein | 0.0 | 100 |
| tcpB | ACK75617.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | CAA45456.1 | - | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | ACK75612.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | ACK75602.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | ACK75642.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | AAK20786.1 | toxin-coregulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| VC0829 | NP_230477.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI-1 | Protein | 0.0 | 99 |
| tcpB | ACK75637.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | ACK75632.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 99 |
| tcpB | ACK75627.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 98 |
| tcpB | ACK75622.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 98 |
| tcpB | ACK75607.1 | toxin co-regulated pilus biosynthesis protein B | Virulence | VPI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tcpB | YP_002819096.1 | toxin co-regulated pilus biosynthesis protein B | VFG0092 | Protein | 0.0 | 99 |
