Gene Information

Name : tcpP (VC395_0842)
Accession : YP_002819093.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : toxin co-regulated pilus biosynthesis protein P
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 911000 - 911665 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence :
ATGGGGTATGTCCGCGTGATTTATCAATTTCCCGATAACCTTTGGTGGAACGAATGCAGTAATCAAGTCTATTATGCACA
AGATCCAATGAAGCCGGAAAGGCTGATTGGTACACCGAGCATAATGCAGGCTAAGTTATTGAAAATACTCTGTGAATATC
ATCCTTCCCCCTGTCCAAATGATCAAATAATTAAAGCACTTTGGCCTCATGGATTTATCAGCTCTGAAAGTCTAACTCAG
GCAATCAAAAGAACCAGAGATTTTTTGAATGATGAACATAAGACGTTGATCGAAAATGTAAAGTTACAAGGTTATCGTAT
TAATATTATACAAGTTATTGTTTCTGAAAACATTGTTGATGAAGCTGACTGTAGTCAAAAAAAATCAGTAAAAGAGCGGA
TAAAAATTGAGTGGGGGAAGATAAACGTAGTTCCTTATCTTGTTTTTTCGGCGCTTTATGTTGCTTTGCTACCTGTGATT
TGGTGGAGTTATGGCCAATGGTATCAACATGAATTAGCCGGCATCACTCATGATCTACGAGATTTAGCAAGGTTACCGGG
GATAACAATCCAAAAACTGTCAGAACAAAAACTCATGTTCGCTATTGATCAACATCAGTGTTCCGTGAATTATGAACAGA
AGACATTAGAATGCACAAAAAATTAA

Protein sequence :
MGYVRVIYQFPDNLWWNECSNQVYYAQDPMKPERLIGTPSIMQAKLLKILCEYHPSPCPNDQIIKALWPHGFISSESLTQ
AIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENIVDEADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVI
WWSYGQWYQHELAGITHDLRDLARLPGITIQKLSEQKLMFAIDQHQCSVNYEQKTLECTKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpP CAA45453.1 - Virulence VPI Protein 2e-101 100
tcpP YP_001216307.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI-1 Protein 3e-101 100
tcpP AAK20753.1 toxin-coregulated pilus biosynthesis protein P Virulence VPI Protein 2e-101 100
tcpP ACK75629.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 2e-101 100
tcpP AAK07626.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 5e-101 99
tcpP ACK75609.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 5e-101 99
tcpP AAK20783.1 toxin-coregulated pilus biosynthesis protein P Virulence VPI Protein 3e-100 98
tcpP ACK75599.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 3e-100 98
tcpP ACK75639.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 3e-100 98
VC0826 NP_230474.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI-1 Protein 5e-100 98
tcpP ACK75634.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 7e-99 97
tcpP ACK75614.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 3e-99 97
tcpP ACK75604.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 2e-99 96
tcpP ACK75619.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 9e-99 96
tcpP AAK07624.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 2e-99 96
tcpP AAK07623.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 4e-98 95
tcpP AAK07625.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 4e-98 95
tcpP ACK75624.1 toxin co-regulated pilus biosynthesis protein P Virulence VPI Protein 1e-90 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcpP YP_002819093.1 toxin co-regulated pilus biosynthesis protein P VFG0089 Protein 2e-100 98