Gene Information

Name : VC395_0309 (VC395_0309)
Accession : YP_002818568.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : putative cadaverine/lysine antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 318138 - 319475 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence : 
ATGTCATCAAATGCAAAAAAAATCGGCCTGATCGCCTGTACGGGTGTGGTGGCTGGCAACATGATGGGCAGTGGTATTGC
GCTGCTTCCTTCTACGCTAGCGAGCGTAGGTTCAATTTCCATTTATAGCTGGCTGATCTGCATTGTTGGCGCACTCAGTT
TGGCGTTTGTGTTTGCTCGTTTGGCAACCAAAAACCCGCAAGAGGGTGGCCCGATTGCTTATGCAGGGGAAGTGTCACCG
GTGTTTGGTTTCCAAACGGGCGTGCTTTACTACCACGCTAACTGGATTGGTAATTTGGCGATTGCGATTACCGGAGTTTC
TTACCTTTCGGTGTTCTTCCCAGTGCTGAATAACCCGATCCCTGCTGGTTTAGCGACCATTGCTTCGGTTTGGCTATTTA
CCTTAGTCAACTTGCTTGGTGGTAGCTGGGTAAGCCGTTTATGTACCATTGGTTTGGTGCTGATTTTGATCCCTGTAGTC
GGTACGGCTCTGTTTGGTTGGACGCACTTTGACAGCGCGCTCTACAGCCAAAACTGGAACGTGTCTGCCGGTAGCGATGG
CCATGCGGTGATCACCGCAGTGCTGATTTGTCTGTGGTCTTTCGTGGGTGTCGAATCGGCGGCGGTTTCTTCCGGTATGG
TCGAAAACCCAAAACGCACGGTGCCACTGGCAACCATGTTAGGTACTGGTCTTGCGGGCCTTATCTATGTGCTATCAACT
CAAATGATCAGCGGCATGTTCCCTGCGTCTGAAGTGGCGGCATCCGGTGCACCTTTTGCACTGGCGACCACGGCACTGTT
TGGTAGCTGGACTGCGCCATTCGTGTCTGCCTTTACTGCACTAGCGTGTTTCACGTCACTTGGCTCTTGGATGATGCTGG
TCGGCGAAGCGGGCAAACGTGCCGCTAACGATGGTAACTTCCCGAAAGTGTTCGGTGAAACCGATCGCAACGGTGTGCCG
AAAAAAGGTCTGCTGATTGCTTCCAGCATGATGACACTGCTGATGCTGGTACTGATGTTCTTCAGCTCAGAAACTGCACA
CGCTTCCGATCTGTTTAACCAACTGACTACCGATGCGGTTCTGCTGACCATGCTGCCTTATTTCTACTCCAGCATTAACC
TGATCCGCTTCGAAGGCATGACCACTCGCAATACGTTTGTGATGTTGTTCTCCGGTATTGCCAGCCTGTTCTGTATGGTG
GCGCTGGCCGGTGCAGAGGGTTCAACCCTGACTGCAACCTTCATCATGTCGCTGATTATTTTGATGTTCTACAGCAAAAA
AGCGGGTCTGGATAAATATCTCGAGACTCATCCACAACAAGCTTCGGCTCAGTTCTGA

Protein sequence : 
MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLATKNPQEGGPIAYAGEVSP
VFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVV
GTALFGWTHFDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGTGLAGLIYVLST
QMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVP
KKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMV
ALAGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQASAQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 2e-127 70
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 2e-127 70
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-132 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC395_0309 YP_002818568.1 putative cadaverine/lysine antiporter VFG1671 Protein 1e-132 68