Gene Information

Name : VC395_1892 (VC395_1892)
Accession : YP_002820124.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : Sialic acid TRAP transporter small permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2012943 - 2013464 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence :
ATGGAGCTTAAGATGTTACGTAAGATAATTAATAATATTGAAGAAATCATTACTGTGCCTCTAATGGCGGCCTTGCTTGC
TGTTTTGACTTGGCAAATTGGTACCCGTTGGCTTCTCAATGATCCTTCTTTGTGGAGTGAAGAGCTTGCCCGATTACTCT
TCATGTATATGTGTTTAGTGGGATGTGCTATCGCCATTAAACGAAGTTCTCACGTCAATATCACTTTTTTCTCTGACAAA
CTTCCTGAAAAGGCGCGCTTGTCTTTAGTCCTATCGTTAGAGATTGCCGTGCTGGTTTCTATTGGTGCAATCATTGTGCT
CGGCTATCAACATGCCCAGCGTAATGCATTCTTTGAATTGATCACATTAGGGATATCGAGTAGCTGGATGAATTATAGCT
TACCTGTGGGTGGCGTGTTTATGGTGTTTAGACAACTCGAAAAAATCTTTAACCTTATGAAGCTGCTACTGGGTGTTAGC
TCATCTGCTTCATTAATTGATCAGCAAGTAACGGAGAGGTAG

Protein sequence :
MELKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSDK
LPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITLGISSSWMNYSLPVGGVFMVFRQLEKIFNLMKLLLGVS
SSASLIDQQVTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 3e-76 100
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 2e-76 100
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 3e-76 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC395_1892 YP_002820124.1 Sialic acid TRAP transporter small permease protein VFG1111 Protein 8e-77 100