Gene Information

Name : VC395_1889 (VC395_1889)
Accession : YP_002820121.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : Putative HTH-type transcriptional regulator ybbH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2009753 - 2010589 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence : 
GTGAATTTGCCTAAAAATCTGATGGTTCGATTGCGCTCGAATACCGAACCTTTGAGCAAAAAACTCAGAGTTGTTGCTGA
TTATGTGCTCGAAAATGCACATGAAGTTCAGTATCAGACGATCACCGATCTAGCGTTTAATACAAAAACAAGCGAAGCCA
CTGTAGTCAGGCTATGCCGTGATTTGGGCTACAAAGGTTATTCGGATTTTAGAATGGCATTGGCGGTTGATCTTAGTCAG
TCTGCAAACCAATCTCAGCCCAAAATGGATGGCGATATTTGCGAAGTTTCTGCGCAAAGCGCGGTAGATAGTTTAATGGA
TACTGCAAAACTGATAGACAGAGCTGCCTTAAATAGAATATGTGAGTTGGTTCATGGGGCTAAGTTTATTGGGTGTGTTG
GTGTGGGAGCATCCAGTATCGTCGGTCGCTATTTGGCGTACCGATTAGTGAGAATAGGTAAAAAAGCCATCATGTATGAA
GATACACACTTGGCGGCAATGAGTGCTGGACAGAGTGTTGTCGGGGATGCATGGTTTGCAATATCGAGCTCAGGTTCTAC
AAAAGAGGTGGTTCATGCGGCCACCCAGGCTCATCAACGCGGTGTGCCAGTTGTATCTCTTACGAATATTAGCCATAGCC
CACTTTCTTCGATTTCAGATGAAATGTTAGTGGCTGCAAGGCCTGAAGGCCCTCTCACTGGCGGTGCTTTTTCTTCTAAA
GTTGGTGCTTTGTTGCTTGTTGATGTTTTGATTAACACACTTTTAGATGTATATCCTGAATATTCAGCCTCCGTATTTGG
TACTGCGGAAGTGATTTTACCTTTAATGGATAGTTAA

Protein sequence : 
MNLPKNLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVDLSQ
SANQSQPKMDGDICEVSAQSAVDSLMDTAKLIDRAALNRICELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYE
DTHLAAMSAGQSVVGDAWFAISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSK
VGALLLVDVLINTLLDVYPEYSASVFGTAEVILPLMDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 1e-119 100
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 1e-119 100
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 9e-120 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC395_1889 YP_002820121.1 Putative HTH-type transcriptional regulator ybbH VFG1108 Protein 5e-120 100