Gene Information

Name : ctxB (VC395_1570)
Accession : YP_002819810.1
Strain :
Genome accession: NC_012582
Putative virulence/resistance : Virulence
Product : cholera enterotoxin, B subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1646195 - 1646569 bp
Length : 375 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAAATTAAAATTTGGTGTTTTTTTTACAGTTTTACTATCTTCAGCATATGCACATGGAACACCTCAAAATATTAC
TGATTTGTGTGCAGAATACCACAACACACAAATACATACGCTAAATGATAAGATATTTTCGTATACAGAATCTCTAGCTG
GAAAAAGAGAGATGGCTATCATTACTTTTAAGAATGGTGCAACTTTTCAAGTAGAAGTACCAGGTAGTCAACATATAGAT
TCACAAAAAAAAGCGATTGAAAGGATGAAGGATACCCTGAGGATTGCATATCTTACTGAAGCTAAAGTCGAAAAGTTATG
TGTATGGAATAATAAAACGCCTCATGCGATTGCCGCAATTAGTATGGCAAATTAA

Protein sequence : 
MIKLKFGVFFTVLLSSAYAHGTPQNITDLCAEYHNTQIHTLNDKIFSYTESLAGKREMAIITFKNGATFQVEVPGSQHID
SQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1456 NP_231099.1 cholera enterotoxin subunit B Not tested CTX Protein 6e-53 99
ctxB YP_004937110.1 cholera enterotoxin subunit B Virulence CTX Protein 7e-54 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctxB YP_002819810.1 cholera enterotoxin, B subunit VFG0108 Protein 2e-53 99
ctxB YP_002819810.1 cholera enterotoxin, B subunit VFG2038 Protein 1e-45 81