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Name : treC (VCM66_0868) Accession : YP_002809637.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 928719 - 930407 bp Length : 1689 bp Strand : + Note : - DNA sequence : ATGAGTAGCTCAACCCAATCCATGCCTTGGTGGAAAACCGCTGCAATTTATCAAATTTATCCGAAAAGTTTTTGCGATAG TGGCGCGAAGGGCGTGGGCGATCTGCAAGGCATTATCAGCAAGCTCGATTATTTGCAAAAGCTTGGGATTGAAGCGATTT GGCTGACGCCGATTTATCAATCGCCTATGGTCGATAATGGGTATGACATTGCCGATTATTACGCGATTAATCCAGACTTT GGCACGATGCAAGATTTCGAACAACTGCTGAAAGAAGCCCATCGTCGTGGTATGCGCATCATCATGGATATCGTGGTTAA CCACACCTCAACCGAACACGCTTGGTTCCAATCTGCATTGGGCGATCGCAATAGCCCTTACCGTGATTACTATATTTGGC GTAAGCCGGTTAACGGTGGTGTGCCGAACAACTGGCAATCCAAATTTGGCGGGAGTGCGTGGGCGCTGGATGAAGCGACC GGTGAGTATTATTTGCATCTGTTTGCCAAAGAGCAGGCCGATTTGAACTGGGAAAATCCGCAAGTTCGAGAAGAAGTAAA AAACATCATCGGATTTTGGGCTGAAAAAGGTGTCGATGGCTTCCGACTTGACGTGATTAACCTCATTTCCAAGCAACAAG ATTTTACCAATGATGACATCGGTGATGGTCGTCGTTTTTACACCGATGGCCCAAGAGTGCATGAGTATCTGCAAGAGATC AGCCGTGATGTTTTCCAGCGTTATGGCAGCGTAACCGTCGGCGAAATGTCTTCAACCACCTTAGAACATTGCCAACAATA TTCTGCGCTCGATGGTCGAGAGCTTTCTATGGTGTTTAATTTCCATCATTTGAAAGTCGATTATCCGAATGGCGAAAAGT GGACGAAAGCGCCGTTTGATTTTCTGCAACTCAAGCAAATTTTCAATCATTGGCAAACGGGGCTGAATGGCAAAGGATGG GGCGCGCTGTTTTGGTGTAACCATGATCAGCCGCGAATTGTGAGCCGTTTAGGTGATGATCAGCAGTACCGAGTTGAGTC AGCCAAAATGCTGGCGGCCACCATTCACCTAATGCAAGGCACACCTTATATCTACCAAGGTGAAGAGATTGGAATGACCA ACCCTGGCTTTACGTCGATCAAGCAGTATCGCGATGTGGAAAGCATCAACATTCACCAAATCATGGTGCAGCAACAAGGT GTCTCTGAAAGTGACATGCTGGCGATTTTGGCGCAAAAATCTCGTGATAATTCACGCACGCCAATGCAGTGGGATGCCAG TCTCAACGCTGGATTTACTCGTGGAGAACCTTGGATTGAAGTGGCGCATAACTATCCTGAAATCAATGCACAGGCCGCGT TAGAAGACCCGCATTCGGTGTTCTATTTCTACCGTCGTTTGCTATCGCTACGTAAGAAAGTGGCGGTGATTACGGACGGT GATTACACCGACTTGTTGCCTGAGCATAAAGAGATTTTTGCTTATCAGCGTCGTAATCAGAAACAAGTGTTGATCTGTTT GAATAACTATTACGGTCACGAAGCCGAATGCGTTCTGCCAGAATTACCGCTCGATGATGCGCTCTACTTGCTAGGCAACT ATCCGGGTATTGAATTACAGCGCGTGTTGGCGCACCAAGTGTTACGTCCATACGAAACACGCATCATCCTGATTGAGTCA CCCCTATAG Protein sequence : MSSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYDIADYYAINPDF GTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEAT GEYYLHLFAKEQADLNWENPQVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW GALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQG VSESDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQRVLAHQVLRPYETRIILIES PL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-134 | 48 |
