Gene Information

Name : VCM66_0775 (VCM66_0775)
Accession : YP_002809547.1
Strain :
Genome accession: NC_012578
Putative virulence/resistance : Unknown
Product : ISVch1 transposase, IS481 group
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 830694 - 831677 bp
Length : 984 bp
Strand : +
Note : -

DNA sequence : 
GTGTCTATGGACAGAGAAATCCAACAAAGACTACAGTGGGTAAAAATGTATGAGGAATGTGGTGATGCAGGCCTCGTATG
TCGACGCTGTGGTATTTCCAGACCAACATTACGAAAGTGGGCTAAGCGATATAAGCAATGTGGAATCGCTGGTCTGGAAA
GCCAGAGCAGACGCCCTCATTCATCTCCAGATACCAAACTCACTGATGAGCTAAGAGCATTGATCCTTACGATGCGTGAC
AAACGCAATTTAGGGGCGCGACGTTTACAAACGGAATTAATCCGACTTCACAAAATACACCTAAGCACAGCGACACTCCA
TAAAGTTTTATCCGAAGCATCAGTCAAACCCATCGTAACTTACCGACGCAAAAAAGATTTCCAAAGATATGAGCGCCCAA
TTCCTGGTGATAGAGTCCAGATGGACACGTGTAAAATAGCGCCTGGAATTTACCAGTATACAGCTATTGATGATTGCTCT
CGCTATCGGGTTCTAAGGTGCTACTCTCGGCGCACAGCAGCAAATACAGTCGACTTTATCGATTGTGTCGTGGAAGAGAT
GCCATTTCCTATCCAGCGTATTCAGACGGACAGAGGGCGTGAATTCTTTGCTGAAAAAGTCCAGAAACAACTCATGATTT
ATGGGATCAAGTTTCGCCCAAATAAGCCTGGCTCACCTCACTTGAATGGCAAAGTGGAACGCTCGCAGAAAACAGATAAA
AGTGAGTTCTATCCGACCATAGATGTCTCTGTGGGGCTGCAAGAACTGGATCTGCTACTAGCTGAATGGCAACACTACTA
CAACTGGGAACGGCCCCACAGCTCGTTAAATGGGCTAACCCCGATAGACAGGATTACTGAGATATCTGATCAAACTCCTT
TGTCTGAAGAGGTATCTCAGAACTACCAGATCAAGAAAGAGCGGTTTCAAGAGCAAAATTACAAGCTCGATCTTCAGCTA
AGAAAATTGAAACCATCTCTATGA

Protein sequence : 
MSMDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMRD
KRNLGARRLQTELIRLHKIHLSTATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMDTCKIAPGIYQYTAIDDCS
RYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDK
SEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVSQNYQIKKERFQEQNYKLDLQL
RKLKPSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK20775.1 putative transposase Not tested VPI Protein 2e-154 100
VC0817 NP_230466.1 transposase Not tested VPI-1 Protein 3e-155 100
VC0395_A0341 YP_001216297.1 transposase Not tested VPI-1 Protein 3e-155 100
unnamed AAC12272.1 putative transposase Not tested VPI Protein 2e-154 100
unnamed AAK20746.1 putative transposase Not tested VPI Protein 2e-154 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCM66_0775 YP_002809547.1 ISVch1 transposase, IS481 group VFG0081 Protein 1e-155 100