|
Name : thiC (VCM66_0061) Accession : YP_002808848.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 59953 - 61890 bp Length : 1938 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCGAACCGTAAACAAGCAAGACTGGAAGCCAAGCGCTTTATTGATACCCTTTCTGTTGAACCCTATCCTAACTCTCA AAAATCTTACCTATTAGGCTCTCGCCCTGATATTCGGGTGCCTGTCAGAGAAATTACTCTCAGCGATACTTTGGTCGGTG GCAGTAAAGATGCACCCATCTTTGAGCCCAATGAGCCTATCTGTGTGTATGACACATCTGGCGTCTATACTGACCCTTCA CATGATATTGATCTCTACAAGGGGCTTCCTAAGCTCAGAGAGGAGTGGATTGAAGAGCGTCGAGATACGCACATTCTGCC TAGTATGAGCTCTCATTTCGCCCGTGAACGCTTAGCGGATGAAACTCTAGATGAACTGCGTTATGGCCATTTACCGCGAA TTCGCCGAGCGATGGGCCAGCATCGAGTCACTCAGTTACATTACGCACGGCAGGGAATCATTACGCCGGAAATGGAGTTT GTGGCGATCCGTGAAAACTCTCGTCGTCTTGCTCATCAAGATCCAAGTCTACTTCAGCAGCATGCTGGGCAGAATTTTGG TGCTCATTTACCCGATCTGATTACTCCTGAGTTTGTGCGTCGTGAGATTGCAGAAGGGCGCGCCATCATCCCATGCAATA TTAATCATCCTGAATCTGAACCCATGATTATTGGCCGCAATTTCTTGGTTAAGGTGAATGCCAATATCGGTAACTCTTCT GTTAGCTCTTCTATTGAAGAAGAAGTCGAGAAGTTAGTTTGGGCGACCCGCTGGGGCGCAGATACTGTGATGGATCTGTC GACAGGGCGAAATATCCATGAAACCCGCGAGTGGATCTTACGTAATAGCCCCGTGCCAATTGGTACTGTACCTATGTATC AGGCGCTGGAAAAAGTGAATGGTGTAGCAGAAAACCTCACATGGGAAGTGATGCGCGATACCTTACTAGAGCAAGCTGAG CAAGGTGTGGACTATTTTACAATTCATGCGGGCTTGCTATTGCGTTATGTGCCGATGACAGCCAAGCGCGTAACGGGCAT CGTTTCTCGTGGCGGCTCGATTATTGCGAAATGGTGTCTTTCTCACCATCAAGAGAATTTCCTTTATACCCATTTTCGCG AAATCTGTGAGATTTGTGCGCAATATGATGTGGCTCTATCTCTAGGGGATGGACTTCGTCCTGGCTCGATTGCTGATGCT AACGATGAAGCGCAATTTGCTGAGTTACGTACCCTTGGTGAGCTAACCCAAATAGCTTGGGAATATGATGTGCAGGTCAT GATTGAAGGGCCGGGTCATGTACCTATGCACTTAATTAAAGCCAATATGGATGAGCAGCTTAAGCATTGTCATGAGGCGC CATTCTATACCCTTGGTCCATTAACTACCGATATTGCCCCGGGTTATGATCACATTACCTCCGGTATCGGTGCGGCCATG ATTGGTTGGTTTGGCTGCGCCATGCTCTGCTATGTCACACCTAAAGAACATTTGGGGCTGCCAAACAAAGAAGATGTCAA AACAGGATTGATTACTTATAAGTTAGCGGCTCATGCAGCAGATTTGGCGAAAGGGCATCCGGGAGCGCAAATTCGTGATA ATGCATTATCAAAAGCACGTTTTGAGTTTCGTTGGGAAGACCAGTTCAATCTTGCGCTTGATCCCGTCACAGCACGCGCT TTCCATGATGAGACCCTACCGCAGGAATCGGGCAAAGTCGCGCACTTTTGCTCTATGTGTGGCCCCAAATTCTGCTCGAT GAAGATCTCGCAAGAGGTCAGGGATTACGCAAATAACCAGACATTAGACACCACCGTCATTGACTTGGTTATGCCTGCAG AATCTATACAGCTGGCGATGCAAGATAAGTCTCGTGAGTTTTTAGCCTCAGGTGCTGAACTCTATCATCCTTTGGTGAAA GAGCCGATCGAGGAGTAA Protein sequence : MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPIFEPNEPICVYDTSGVYTDPS HDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADETLDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEF VAIRENSRRLAHQDPSLLQQHAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRDTLLEQAE QGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADA NDEAQFAELRTLGELTQIAWEYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLALDPVTARA FHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQTLDTTVIDLVMPAESIQLAMQDKSREFLASGAELYHPLVK EPIEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 71 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 71 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 70 |
