Gene Information

Name : VCM66_0474 (VCM66_0474)
Accession : YP_002809250.1
Strain :
Genome accession: NC_012578
Putative virulence/resistance : Unknown
Product : putative hemolysin
Function : -
COG functional category : R : General function prediction only
COG ID : COG3176
EC number : -
Position : 505403 - 507163 bp
Length : 1761 bp
Strand : -
Note : -

DNA sequence :
ATGCTTTCTACTTCTCCATTTGTTCTGCCACGAAAAACCCCATTTGGTTTAGGTGAACACTTAGCGGAATGGGCAACAGG
ACTGAAACGTCTCAATCAATTCTATGCTCAACGTCCAGCAAGCGGTGATACTCAAGCGTTTTTGCGCTTTACCTTGGATG
TTCTTGGTATCGATTATCAAGTAGTACGCGGCAAGCTCACACATGTTCCAGCTCAAGGGGCAACTATCGTGGTCGCTAAC
CATCCTTTAGGCTGCGTTGAAGGGGTGATTTTGGCTGAGCTGCTGCTTTGCGTTCGCTCAGATGTAAAAATTCTCGCTAA
TCAGTATTTAAAGCTGGTGCCCGAGCTTACCTCACTATTTATCGGCGTCGATGTGTTTGAAGGTGCCGATGCCGCAAAAG
CGAATCTGCATGCCCTTCGTCAAGCGCATAAACACCTTGAGCAAGGTGGGTTGCTACTGATGTTTCCTGCTGGGGAAGTC
TCCCAATTGGTTGACAGCAAGCAAGGTCGTTTGGAGGACAAAGAGTGGAGCCAATCGGTCAGCCGCCTCGTTAAAAAACA
TCAAGCGCATACGGTCCCAGTTTATATTGATGGCCATAACTCAACCCCTTTTTACCTTGCAGGAAAAATTCACCCTATGC
TGCGCACCTTGATGTTGGGGCGCGAGCTGCTCAATAAGCAGCATACTCAAATTGGTATCGCGATTGGTGAGGGGATTTCA
CACAGCGAAGTACAGCATCTTTGTGATCAACAGTTGGTCAATTATCTGCGCCTCAATACCTATCTTTTGCAATCTTCTCC
CGTGCGCAACAAGACCGCCAGTGATCGATCCTTGCCTCCCGTTGCAGAGCGCCTTCCATTAGCCGATCTGCTCGAAGATA
TCGCGCAGTTGCCTTACGCCGACCATATGCTGCGCCATAACCAATTTGATGTGTATTGCACCACAGCGGATAACATTCCT
TCGTTGATGCATGAAATTGGCCGCATTCGCGAGTTGAATTTCCGTGAGGTGGGCGAAGGAACGGGCTGTGCGCTGGATAT
TGATCGATTTGATCGCGATTACCTTCACCTATTCATTTGGGATAGAGAGAAAAATCAGCTGGTGGGCGCATACCGTTTAG
GGCTCGTTGATAAGCTTATTGAGCACAAGGGGATCAGCGGCCTCTACTCCAGTACCCTATTTCATTATGATCAACGCTTC
CTCAATAACATGGGCAATGCGATTGAAATGGGGCGTTCGGTGATTGACAGCCAATATCAAAAAAGCATGGCGGCCCTGCT
TTTGCTTTGGAAAGGCATTGGTACTTATGTCGAACGCCACCCACAATATACCCACCTTTTTGGCCCTGTGAGTATCAGCA
ACGATTACAGTGAACAAGCCAGACGTTTACTCGCCGATACCATGACTCTGCATTATTACGATAGTGAACAAGCCGAGTTA
GTGATGGCCACCAACCCTCTACCTACAGGGCAAGCACAATGGAATGCCAGCCTTTTGACGTCACTTGCCGACTTGCAACT
CCTGTCACGAGTGATTGCTCGGATCGATGAAGGAAAGGGAATTCCGGTGCTACTACGCCAGTATCTAGGATTAAACGGAA
AGCTGGTGAGCTTTAATGTGGATCCTGCGTTCAATAACGCACTAGATGGCTTGATCGTAGTTGATCTTCGCAATGTGCCC
ACGAAAACCTTAGCGCGTTACATGGGGCAATCTGAAGCTCTGCGCTATCTTGCCACCCACCAATATTTCAGCGATATCTA
A

Protein sequence :
MLSTSPFVLPRKTPFGLGEHLAEWATGLKRLNQFYAQRPASGDTQAFLRFTLDVLGIDYQVVRGKLTHVPAQGATIVVAN
HPLGCVEGVILAELLLCVRSDVKILANQYLKLVPELTSLFIGVDVFEGADAAKANLHALRQAHKHLEQGGLLLMFPAGEV
SQLVDSKQGRLEDKEWSQSVSRLVKKHQAHTVPVYIDGHNSTPFYLAGKIHPMLRTLMLGRELLNKQHTQIGIAIGEGIS
HSEVQHLCDQQLVNYLRLNTYLLQSSPVRNKTASDRSLPPVAERLPLADLLEDIAQLPYADHMLRHNQFDVYCTTADNIP
SLMHEIGRIRELNFREVGEGTGCALDIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRF
LNNMGNAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLADTMTLHYYDSEQAEL
VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIPVLLRQYLGLNGKLVSFNVDPAFNNALDGLIVVDLRNVP
TKTLARYMGQSEALRYLATHQYFSDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 0.0 100