|
Name : dnaB (VCM66_0355) Accession : YP_002809134.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 371321 - 372727 bp Length : 1407 bp Strand : + Note : unwinds double stranded DNA DNA sequence : ATGGCAGATCCACGTACTGATAATCGAAACCGTAAAATTCCCGACGCACAAGTCGATGCAATTAAAGTCCCACCGCATTC ATTAGAAGCTGAGCAATCCGTCATTGGTGGCTTGCTGCTGGATAATGAGCGCTGGGATACGGTCTCAGAACACGTGATGA CTCAGGACTTCTACAGCCGCCCGCATCGTTTGATTTTTGACGGGGTAAAATCGATTTTGGAGGCGGGTAAACCGCTCGAT CTCATTACCTTGTCCGAATATCTTGAGCAGCGTGAGCAGTTGGAAGATGTCGGTGGCTTTGCCTATTTGGCCGATTTGGC CAAAAACACGCCCAGTGCTGCCAACATTAATGCCTATGCGGAGATTGTGGCCGAACGGGCTTTGGTGCGTAATCTGATTG GTGTTGCCAATGAGATTGCCGATGCGGGATACGATCCACAAGGGCGCAACGCTGAAGATTTGCTGGATCTGGCGGAAAGT AAAGTTTTTGCGATTGCCGAAGCGCGTACCAGTGAAAATGAAGGCCCGAAAAACGTGGATAGCATTCTAGAGCGCACGCT AGAGCGGATTGAGCTGCTCTACAAAACGCCGCAGGATGGGGTCACTGGAGTGAACACGGGCTTTACCGACCTGAATAAAA AGACGGCTGGTTTGCAAGGCTCGGATCTGATCATCGTCGCAGCGCGTCCTTCGATGGGTAAAACCACTTTTGCGATGAAC CTGTGTGAAAACGCCGCGATGGAGCAAGATAAACCTGTGCTGATCTTCTCGCTGGAGATGCCCGCCGAACAGATCATGAT GCGTATGCTGGCCTCGTTATCACGTGTCGACCAAACCAAAATTCGTACCGGTCAACTGGATGATGAAGATTGGGCGCGTA TCTCTTCCACCATGGGGATTCTCATGGAGAAGAAGAACATGTACATCGATGATAGCTCAGGCCTAACCCCCACCGAAGTT CGCTCGCGTGCCCGACGCATTGCTCGTGAACACGGAGGCTTGTCGCTCATCATGGTCGACTATTTACAGCTGATGCGTGT ACCGGCATTGACCGATAACCGTACACTGGAAATTGCTGAAATTTCTCGCTCACTCAAAGCGTTAGCTAAAGAATTGAATG TGCCCGTGGTTGCGCTTTCGCAGTTGAACCGTTCTTTGGAGCAGCGTGCGGATAAGCGTCCAGTCAACTCGGATCTGCGT GAATCGGGTTCGATTGAGCAGGATGCTGACTTGATCATGTTTATCTATCGAGATGAGGTGTATCACCCAGATAGTCCGCT AAAAGGCACGGCGGAAATCATTATTGGTAAGCAACGTAACGGCCCGATTGGTTCGGTGCGTTTGACTTTCCAAGGTCACT ATTCTCGTTTCGACAACTATGCTGGACCTGCATTTGACGATGAGTAA Protein sequence : MADPRTDNRNRKIPDAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILEAGKPLD LITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIGVANEIADAGYDPQGRNAEDLLDLAES KVFAIAEARTSENEGPKNVDSILERTLERIELLYKTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMN LCENAAMEQDKPVLIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSGLTPTEV RSRARRIAREHGGLSLIMVDYLQLMRVPALTDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLR ESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEIIIGKQRNGPIGSVRLTFQGHYSRFDNYAGPAFDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-97 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-106 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-105 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-103 | 50 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 6e-100 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-88 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-88 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-86 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 8e-83 | 47 |
