Gene Information

Name : epsK (VCM66_2646)
Accession : YP_002811391.1
Strain :
Genome accession: NC_012578
Putative virulence/resistance : Virulence
Product : general secretion pathway protein K
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3156
EC number : -
Position : 2836478 - 2837488 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence :
ATGCGGGCTAAACAGCGCGGCGTGGCGTTAATTGTGATTCTGCTCCTGCTGGCGGTGATGGTCTCGATTGCTGCGACCAT
GGCCGAACGTCTGTTTAGTCAGTTTCAGCGTGCCACGCATCAGCTCAACTATCAGCAGGCTTATTGGTACAGTCTTGGCG
TCGAAGCGCTAGCGAAAAAAGGCATTGAGCAGAGCTACCAAGACAGTGAAACCATCAATTTGAGTCAGCCTTGGGCTTTG
AAAGAGCAAACTTATCCGCTCGATTACGGACAGGTGCGCGGCAAAATCCGCGATATGCAAGCTTGCTTTAATCTCAATGC
ACTCGCGGGGGTAAAGCTCACGCCAGACAGCGTGAAAAAACCGTATTTGCTGACGGTGCTGCAAGCGCTGCTTGAAGGGC
TGGAAGTGGAGAGTTATCAAGCGGAAGTGATTGCCGATTCGACGTTAGAGTTTATTGATAAAGATGACTCTGTACGCACC
GCTTATGGGGTGGAAGACAGTTACTATGAATCGATGATCCCGGCCTATATGGCGGCGGATACTTGGTTGGCCGATGCGAG
CGAGTGGCGTGCGGTACAGCAAGTGGGGGGAGAAACGATGAATAAAGCCTTACCTTATGTGTGTGCGTTGCCAACCGATC
AATGGCGCTTGAATGTGAACACGTTACCCGCTGAGCAAGCGGCACTGCTGGCGGCCATGTTTAGCCCAACATTGAGTCCG
GAAAGCGCGAAAACCTTGCTCGAAGGGCGACCTTTCGATGGTTGGGCGAGTGTGGATGATTTTCTTGCCCAATCGGCACT
CACCGGAGTGGATAACGCGGTGCGTGAGGAAGCGAAGAAATACCTCAGTGTAGATAGCCATTATTTTGAATTAGATGCAC
AGGTGCTGGTCGATACGTCTCGCGTGCGGATCCGCAGCCTGTTTTACAGTAACGATAAGAAAACTGCGACGGTGATACGC
CGCCGCTTTGGAGGGATCAGTGAGCGAGTTTCTGACCGTTCGACTGAGTAG

Protein sequence :
MRAKQRGVALIVILLLLAVMVSIAATMAERLFSQFQRATHQLNYQQAYWYSLGVEALAKKGIEQSYQDSETINLSQPWAL
KEQTYPLDYGQVRGKIRDMQACFNLNALAGVKLTPDSVKKPYLLTVLQALLEGLEVESYQAEVIADSTLEFIDKDDSVRT
AYGVEDSYYESMIPAYMAADTWLADASEWRAVQQVGGETMNKALPYVCALPTDQWRLNVNTLPAEQAALLAAMFSPTLSP
ESAKTLLEGRPFDGWASVDDFLAQSALTGVDNAVREEAKKYLSVDSHYFELDAQVLVDTSRVRIRSLFYSNDKKTATVIR
RRFGGISERVSDRSTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspK YP_854400.1 type II secretion protein GspK Not tested PAI I APEC-O1 Protein 6e-41 41
gspK CAE85227.1 GspK, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
epsK YP_002811391.1 general secretion pathway protein K VFG2054 Protein 4e-40 41