Gene Information

Name : ribD (VCM66_2194)
Accession : YP_002810946.1
Strain :
Genome accession: NC_012578
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 2362334 - 2363437 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTATGTTTACCTCTTTTGATCATCAAATGATGTCTCGCGCGATTGAACTTGCGTGGCGCGGGCGTTTTACCACTTC
TCCTAATCCTAATGTCGGCTGCGTGATCACTCGCGGTGAGCAGATTGTAGGGGAAGGTTTCCATTTTCGCGCGGGCGAAC
CCCATGCTGAAGTGCATGCTATGCGCCAAGCCGGTGAGCTTACTCGCGGTGCGACCGCTTATGTCACTTTAGAGCCTTGC
TCTCATTATGGTCGCACACCGCCTTGTGCTGAAGGGCTTATTAAAGCCGGGGTTGCGAAAGTGATTTGCGCAATGCAAGA
CCCTAACCCACAAGTGGCGGGGAAGGGCGTACAAATGCTGCGTGATGCCGGGATTGAGGTTGAAGTGGGGTTGCTGGAAG
CGGATGCTCGAGTACTCAACCGCGGTTTTCTAAAACGTATGGAAACCGGCATGCCTTTTGTGCAGCTTAAAATGGCGGCG
AGTCTCGATGGACAAACCGCGCTCGCTAACGGTAAAAGCCAGTGGATTACCTCTCCTGCAGCACGTAAAGATGTTCAGCG
GTTTCGCGCGCAAGCCAGTGCGATTCTCTCCACCAGTCAAACGGTGCTGGCGGATAATGCTTCTCTGGCGGTGCGTTGGT
ACGATTTACCGTCATCGGTACAGGCGCAATACGCAGAAGCGGATTTGCGTCAGCCACTGCGGGTGATTTTGGATCGTCAA
CATCAATTGCATCCAGAGTTAGCGTTATACCAAACACCTTCACCCGTGCTGCGAGTTGCCAGCGAGAATGCCGAACTCTG
TATCTCTGCTGAGAACGGAAAGCTTGATTTGCGTGAGCTTTTGGCACTACTCGCTCAGCAACACAATGTGAATCAACTCT
GGGTAGAGGCGGGGAGCCAACTGGCTCAATCTTTGATTGAGCAAAAGTTGGTGGATGAAATCATTCTCTATTTAGCGCCG
AAACTGATGGGCAGTGATGGCCGTGGTTTATTTGGCGCGCTCGGTTTGACGGAAATGGCTGAGGCCATTGAACTCAAAAT
AGAAGATTGTCGAATGGTGGGGGCAGATTTGCGGATCATCGCCACCCCAAAAACAAAAGATTAG

Protein sequence : 
MPMFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGELTRGATAYVTLEPC
SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAA
SLDGQTALANGKSQWITSPAARKDVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQ
HQLHPELALYQTPSPVLRVASENAELCISAENGKLDLRELLALLAQQHNVNQLWVEAGSQLAQSLIEQKLVDEIILYLAP
KLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADLRIIATPKTKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-64 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-64 49