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Name : topB (VCM66_1967) Accession : YP_002810721.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2137598 - 2139541 bp Length : 1944 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGACCCGGTTATTTATTGCAGAAAAACCTAGCCTTGCGCGAGCGATTGCCGATGCACTACCCAAGCCTCATAAAAAAGA ACAAGGGTGTATTCGCTGCGCTAATGGCGATATCGTGACTTGGTGCATTGGTCACCTTCTCGAACAAGTCGAGCCAGACG CTTATGATGAGCGATACAAAAAGTGGAATATGGCGGATTTGCCTATCATTCCAGAGCAGTGGCAACTGCGCCCAAGAAAA TCCTCCTCTCAACAGCTCACCGTCGTTCGTAAGCTACTCAAAGAAGCAACGCAGATTATCCATGCCGGTGACCCCGATCG CGAAGGGCAACTGTTGGTGGATGAGGTGATCGATTATTGCAAAGTGCCGAAGAGCAAAAAAGAAACCGTGCAGCGCCTTT TGATCAGTGATTTAAACCTTTCTGCAGTCAAGCGTGCCTTACAAGGCTTGCGCAGTAATCGAGAGTTTATTCCACTCTCT GTTTCGGCTTTAGCGCGTTCACGCGCTGACTGGCTGTATGGTATGAATATGTCTCGAGCTTATACCCTGCTTGGGAAAAA AGCCGGTTATCAAGGCGTGCTCTCCGTAGGGCGAGTACAGACGCCAGTACTGGGTTTAGTGGTGCGACGGGATGAAGAGA TCGAACATTTTATCCCGCATGATTATTTTACTCTTGATGCTTTAATTCCATACCAAAATGGCACCGAATACTTCGACATA CGTGCCCGTTGGAAACCAAGTGAGGCCTGCTTACCTTGGCAAGATGAAGAAGGGCGGGTCACTAACCGTAAATTGGTGGA CAATGTTGCCAGTCGCATTGCGAATCAGCCCGCGACTGTGACTGAATCAGAGCAAGATCAAACCAAGCAAGCGGCCCCTT TGCCCTATTCACTTTCAGCGCTGCAAATTGATGCGGCAAAACGGTATAACTTCAGCGCACAACAAGTGTTGGATCTGTGC CAGTCTCTTTATGAAAAGCATAAATTGATCACTTATCCGCGATCTGATTGCCGATACTTACCGAAAGAGCATTTAGCTCA GGCTCCCGACGTGGTAGCGGCAATAGCCAACAATGCGCAAGAGATGGTCACCGCAGTGAATGATGCGGATTTATCACTAC GCTCCAAAGCGTGGAATGACAGTAAAGTCGACGCGCACCACGCCATCATTCCAACGCCGAAGAAAGCGTCGGTTAATGCG CTGTCAGGGCATGAAATGAAAGTCTATCAACTGATTGCGCGTCAGTACCTTATGCAATTTTATCCTGCGGCGATTTATGC AGAAGCCAAACTGGTTTTTAACATCGCTGGCGGCATTTTTATTGCCAAAGGGCGTCAACTGCTCAGTGCTGGATGGAAAG TGTTGACCGGTCAGCAAGATGAGCAAGAAGAGTGCGTGGATAAAGTCCCCCCTTTGCCTGTTGGCATTGTGCTGCAGTGT CGAGAAGGGGAAATAAAACAGAGACAAACCGAGCCGCCACGCCATTTTACGGAAGCTACATTACTGCAGGCGATGACGGG GATTGCCCGTTTCGTGGCCGATAAAGAGCTGAAAAAAATTCTGCGTGAGACGGATGGTTTAGGCACTGAAGCCACACGAG CTGGGATCTTGGATACCTTGTTTAAGCGTGGATTACTGCAGCGTGATAACAAGCTCATTAAAAGCACGCCAGCTGGCCGA GGTTTGATTCATGCGTTACCCAGTGAAGCCACCTATCCCGATATGACGGCACATTGGGAACATCAACTGCAAGCGATCGC GGAAAAGGGGCAAGCTTATCAACCCTTTATGCAGACACTACAAGGCCGCCTCGAGCAGTTAATTGAGCAAGTTCAGGTCG CACCGGTTCCTGTATCATTGCAAGCTTTGCCAGCGGTGAGTAAACCTGCCTTTAAGCGCACACGCCGTGCACCAAAGAGT AAAGCCAGAACGTATAAAGCTTAA Protein sequence : MTRLFIAEKPSLARAIADALPKPHKKEQGCIRCANGDIVTWCIGHLLEQVEPDAYDERYKKWNMADLPIIPEQWQLRPRK SSSQQLTVVRKLLKEATQIIHAGDPDREGQLLVDEVIDYCKVPKSKKETVQRLLISDLNLSAVKRALQGLRSNREFIPLS VSALARSRADWLYGMNMSRAYTLLGKKAGYQGVLSVGRVQTPVLGLVVRRDEEIEHFIPHDYFTLDALIPYQNGTEYFDI RARWKPSEACLPWQDEEGRVTNRKLVDNVASRIANQPATVTESEQDQTKQAAPLPYSLSALQIDAAKRYNFSAQQVLDLC QSLYEKHKLITYPRSDCRYLPKEHLAQAPDVVAAIANNAQEMVTAVNDADLSLRSKAWNDSKVDAHHAIIPTPKKASVNA LSGHEMKVYQLIARQYLMQFYPAAIYAEAKLVFNIAGGIFIAKGRQLLSAGWKVLTGQQDEQEECVDKVPPLPVGIVLQC REGEIKQRQTEPPRHFTEATLLQAMTGIARFVADKELKKILRETDGLGTEATRAGILDTLFKRGLLQRDNKLIKSTPAGR GLIHALPSEATYPDMTAHWEHQLQAIAEKGQAYQPFMQTLQGRLEQLIEQVQVAPVPVSLQALPAVSKPAFKRTRRAPKS KARTYKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 5e-110 | 41 |
